Gene name: CHM7
Reference locus (S288C): YJL049W
Gene biotype: protein_coding
Description: Uncharacterized protein YJL049W; Yeast homolog of human CHMP7, localizes to the endoplasmic reticulum presumably as part of an ESCRT-III like complex; null mutant has growth defect at 37 C in an apq12 deletion background; non-essential gene
Top 10 interactors (score): SNF7 (0.994); VPS24 (0.98); DID4 (0.966); DID2 (0.962); VPS20 (0.96); IST1 (0.956); VPS60 (0.948); VPS25 (0.94); SRC1 (0.918); APQ12 (0.896); HEH2 (0.832); LAP2 (0.817); VPS4 (0.73); NUR1 (0.695); VTA1 (0.614); NUP116 (0.592); POM33 (0.574); BRR6 (0.574); NUP188 (0.567); CSM1 (0.562)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005304.1:328783-330135:+ | gene-YJL049W_AKU4011 | rna-NM_001181482.3_AKU4011 | cds-NP_012486.3_AKU4011 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000190.1:283660-285012:- | gene-YJL049W_BG1 | rna-NM_001181482.3_BG1 | cds-NP_012486.3_BG1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005512.1:341361-342713:+ | gene-YJL049W_Bruggeman | rna-NM_001181482.3_Bruggeman | cds-NP_012486.3_Bruggeman | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005528.1:346598-347950:+ | gene-YJL049W_CAT1 | rna-NM_001181482.3_CAT1 | cds-NP_012486.3_CAT1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005368.1:340437-341789:+ | gene-YJL049W_CBS1585 | rna-NM_001181482.3_CBS1585 | cds-NP_012486.3_CBS1585 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005352.1:358487-359839:+ | gene-YJL049W_CBS436 | rna-NM_001181482.3_CBS436 | cds-NP_012486.3_CBS436 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005336.1:329542-330894:+ | gene-YJL049W_CBS6412 | rna-NM_001181482.3_CBS6412 | cds-NP_012486.3_CBS6412 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005320.1:330889-332241:+ | gene-YJL049W_CBS6413 | rna-NM_001181482.3_CBS6413 | cds-NP_012486.3_CBS6413 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001531.1:328437-329789:+ | gene-YJL049W_CENPK1137D | rna-NM_001181482.3_CENPK1137D | cds-NP_012486.3_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005480.1:332621-333973:+ | gene-YJL049W_EthanolRed | rna-NM_001181482.3_EthanolRed | cds-NP_012486.3_EthanolRed | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005544.1:344195-345547:+ | gene-YJL049W_FaliES1 | rna-NM_001181482.3_FaliES1 | cds-NP_012486.3_FaliES1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000210.1:7349-8701:- | gene-YJL049W_JAY291 | rna-NM_001181482.3_JAY291 | cds-NP_012486.3_JAY291 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005416.1:342516-343868:+ | gene-YJL049W_MUCL30387 | rna-NM_001181482.3_MUCL30387 | cds-NP_012486.3_MUCL30387 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005448.1:338556-339908:+ | gene-YJL049W_MUCL30388 | rna-NM_001181482.3_MUCL30388 | cds-NP_012486.3_MUCL30388 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005288.1:333191-334543:+ | gene-YJL049W_MUCL39482 | rna-NM_001181482.3_MUCL39482 | cds-NP_012486.3_MUCL39482 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005432.1:339885-341237:+ | gene-YJL049W_MUCL42920 | rna-NM_001181482.3_MUCL42920 | cds-NP_012486.3_MUCL42920 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011819.1:345952-347304:+ | gene-YJL049W_NCIM3186 | rna-NM_001181482.3_NCIM3186 | cds-NP_012486.3_NCIM3186 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005272.1:331887-333239:+ | gene-YJL049W_NCYC1407 | rna-NM_001181482.3_NCYC1407 | cds-NP_012486.3_NCYC1407 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994149.1:344285-345637:+ | gene-YJL049W_PE2H3 | rna-NM_001181482.3_PE2H3 | cds-NP_012486.3_PE2H3 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999881.1:343930-345282:+ | gene-YJL049W_PE2H4 | rna-NM_001181482.3_PE2H4 | cds-NP_012486.3_PE2H4 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001142.9:345973-347325:+ | gene-YJL049W_S288C | rna-NM_001181482.3_S288C | cds-NP_012486.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000003.1:141845-143197:+ | gene-YJL049W_SA1 | rna-NM_001181482.3_SA1 | cds-NP_012486.3_SA1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005496.1:337608-338960:+ | gene-YJL049W_ThermosaccDry | rna-NM_001181482.3_ThermosaccDry | cds-NP_012486.3_ThermosaccDry | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005464.1:340098-341450:+ | gene-YJL049W_VR1 | rna-NM_001181482.3_VR1 | cds-NP_012486.3_VR1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000021.1:318985-320337:+ | gene-YJL049W_ZTW1 | rna-NM_001181482.3_ZTW1 | cds-NP_012486.3_ZTW1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047496.1:343026-344378:+ | gene-YJL049W_Sparadoxus | rna-NM_001181482.3_Sparadoxus | cds-NP_012486.3_Sparadoxus | 85.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |