Gene name: CHA1
Reference locus (S288C): YCL064C
Gene biotype: protein_coding
Description: Catabolic L-serine/threonine dehydratase; Catabolic L-serine (L-threonine) deaminase; catalyzes the degradation of both L-serine and L-threonine; required to use serine or threonine as the sole nitrogen source, transcriptionally induced by serine and threonine; Belongs to the serine/threonine dehydratase family
Top 10 interactors (score): LEU2 (0.973); THR4 (0.973); TRP5 (0.965); ILV6 (0.962); ILV2 (0.958); GLY1 (0.95); SHM1 (0.948); SHM2 (0.944); AGX1 (0.939); HOM6 (0.933); CYS4 (0.931); SER2 (0.927); THR1 (0.923); BAT2 (0.918); DSD1 (0.912); BAT1 (0.908); CHO1 (0.9); MET6 (0.896); ILV1 (0.877); GLO1 (0.856)
Homologues (species, bitscore): SDSL (Homo sapiens, 188.3); Sdsl (Mus musculus, 204.9); SDSL (Danio rerio, 175.6); sdsl (Xenopus tropicalis, 212.2); CG8129 (Drosophila melanogaster, 95.9); K01C8.1 (Caenorhabditis elegans, 89.0); OMR1 (Arabidopsis thaliana, 88.6)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005297.1:17089-18171:- | gene-YCL064C_AKU4011 | rna-NM_001178706.1_AKU4011 | cds-NP_001018030.1_AKU4011 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000090.1:2009-3091:- | gene-YCL064C_BG1 | rna-NM_001178706.1_BG1 | cds-NP_001018030.1_BG1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005505.1:3925-5007:- | gene-YCL064C_Bruggeman | rna-NM_001178706.1_Bruggeman | cds-NP_001018030.1_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005521.1:16972-18054:- | gene-YCL064C_CAT1 | rna-NM_001178706.1_CAT1 | cds-NP_001018030.1_CAT1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005361.1:17772-18854:- | gene-YCL064C_CBS1585 | rna-NM_001178706.1_CBS1585 | cds-NP_001018030.1_CBS1585 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005345.1:16320-17402:- | gene-YCL064C_CBS436 | rna-NM_001178706.1_CBS436 | cds-NP_001018030.1_CBS436 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005329.1:5530-6612:- | gene-YCL064C_CBS6412 | rna-NM_001178706.1_CBS6412 | cds-NP_001018030.1_CBS6412 | 99.1 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005313.1:16544-17626:- | gene-YCL064C_CBS6413 | rna-NM_001178706.1_CBS6413 | cds-NP_001018030.1_CBS6413 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001524.1:15392-16474:- | gene-YCL064C_CENPK1137D | rna-NM_001178706.1_CENPK1137D | cds-NP_001018030.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005473.1:15318-16400:- | gene-YCL064C_EthanolRed | rna-NM_001178706.1_EthanolRed | cds-NP_001018030.1_EthanolRed | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005537.1:16080-17162:- | gene-YCL064C_FaliES1 | rna-NM_001178706.1_FaliES1 | cds-NP_001018030.1_FaliES1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000225.1:67170-68252:+ | gene-YCL064C_JAY291 | rna-NM_001178706.1_JAY291 | cds-NP_001018030.1_JAY291 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005409.1:3505-4587:- | gene-YCL064C_MUCL30387 | rna-NM_001178706.1_MUCL30387 | cds-NP_001018030.1_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005441.1:3804-4886:- | gene-YCL064C_MUCL30388 | rna-NM_001178706.1_MUCL30388 | cds-NP_001018030.1_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005281.1:18159-19241:- | gene-YCL064C_MUCL39482 | rna-NM_001178706.1_MUCL39482 | cds-NP_001018030.1_MUCL39482 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005425.1:4081-5163:- | gene-YCL064C_MUCL42920 | rna-NM_001178706.1_MUCL42920 | cds-NP_001018030.1_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011812.1:15430-16512:- | gene-YCL064C_NCIM3186 | rna-NM_001178706.1_NCIM3186 | cds-NP_001018030.1_NCIM3186 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005265.1:18484-19566:- | gene-YCL064C_NCYC1407 | rna-NM_001178706.1_NCYC1407 | cds-NP_001018030.1_NCYC1407 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994142.1:16255-17337:- | gene-YCL064C_PE2H3 | rna-NM_001178706.1_PE2H3 | cds-NP_001018030.1_PE2H3 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999874.1:16212-17294:- | gene-YCL064C_PE2H4 | rna-NM_001178706.1_PE2H4 | cds-NP_001018030.1_PE2H4 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001135.5:15798-16880:- | gene-YCL064C_S288C | rna-NM_001178706.1_S288C | cds-NP_001018030.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000061.1:2946-4028:- | gene-YCL064C_SA1 | rna-NM_001178706.1_SA1 | cds-NP_001018030.1_SA1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005489.1:16399-17481:- | gene-YCL064C_ThermosaccDry | rna-NM_001178706.1_ThermosaccDry | cds-NP_001018030.1_ThermosaccDry | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005457.1:21693-22775:- | gene-YCL064C_VR1 | rna-NM_001178706.1_VR1 | cds-NP_001018030.1_VR1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000004.1:16627-17709:- | gene-YCL064C_ZTW1 | rna-NM_001178706.1_ZTW1 | cds-NP_001018030.1_ZTW1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047489.1:46336-47418:- | gene-YCL064C_Sparadoxus | rna-NM_001178706.1_Sparadoxus | cds-NP_001018030.1_Sparadoxus | 89.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |