Gene name: CEX1
Reference locus (S288C): YOR112W
Gene biotype: protein_coding
Description: Cytoplasmic export protein 1; Component of nuclear aminoacylation-dependent tRNA export pathway; cytoplasmic; interacts with nuclear pore component Nup116p; copurifies with tRNA export receptors Los1p and Msn5p, as well as eIF-1a; required for activation of RAN GTPase Gsp1p and dissociation of receptor-tRNA-Gsp1p export complex; recruits Rna1p from cytoplasm to NPC, facilitates Rna1p activation of Gsp1p GTPase activity by enabling Rna1p to gain access to Gsp1p-GTP bound to export receptor tRNA complex
Top 10 interactors (score): GSP1 (0.975); SNF5 (0.962); LOS1 (0.941); NUP116 (0.906); YLR326W (0.89); YOR114W (0.865); RNA1 (0.861); GSP2 (0.834); MSN5 (0.826); SFH1 (0.819); IME2 (0.811); SCY1 (0.795); MRI1 (0.76); UTP8 (0.758); MES1 (0.745); RPO31 (0.74); YRB1 (0.717); YML108W (0.691); TEF2 (0.687); TRS33 (0.68)
Homologues (species, bitscore): SCYL1 (Homo sapiens, 123.6); Scyl1 (Mus musculus, 121.7); ENSDARP00000007198 (Danio rerio, 136.7); scyl1 (Xenopus tropicalis, 118.6); yata (Drosophila melanogaster, 116.3); W07G4.3 (Caenorhabditis elegans, 114.4); CTEXP (Arabidopsis thaliana, 133.7)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005309.1:515561-517849:+ | gene-YOR112W_AKU4011 | rna-NM_001183531.1_AKU4011 | cds-NP_014755.1_AKU4011 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000171.1:61212-63500:- | gene-YOR112W_BG1 | rna-NM_001183531.1_BG1 | cds-NP_014755.1_BG1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005517.1:519150-521435:+ | gene-YOR112W_Bruggeman | rna-NM_001183531.1_Bruggeman | cds-NP_014755.1_Bruggeman | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005533.1:519139-521427:+ | gene-YOR112W_CAT1 | rna-NM_001183531.1_CAT1 | cds-NP_014755.1_CAT1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005373.1:511100-513388:+ | gene-YOR112W_CBS1585 | rna-NM_001183531.1_CBS1585 | cds-NP_014755.1_CBS1585 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005357.1:515875-518160:+ | gene-YOR112W_CBS436 | rna-NM_001183531.1_CBS436 | cds-NP_014755.1_CBS436 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005341.1:509612-511900:+ | gene-YOR112W_CBS6412 | rna-NM_001183531.1_CBS6412 | cds-NP_014755.1_CBS6412 | 99.2 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005325.1:516909-519197:+ | gene-YOR112W_CBS6413 | rna-NM_001183531.1_CBS6413 | cds-NP_014755.1_CBS6413 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001536.1:531588-533873:+ | gene-YOR112W_CENPK1137D | rna-NM_001183531.1_CENPK1137D | cds-NP_014755.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005485.1:512112-514400:+ | gene-YOR112W_EthanolRed | rna-NM_001183531.1_EthanolRed | cds-NP_014755.1_EthanolRed | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005549.1:515614-517902:+ | gene-YOR112W_FaliES1 | rna-NM_001183531.1_FaliES1 | cds-NP_014755.1_FaliES1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000063.1:41341-43629:- | gene-YOR112W_JAY291 | rna-NM_001183531.1_JAY291 | cds-NP_014755.1_JAY291 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005421.1:523708-525993:+ | gene-YOR112W_MUCL30387 | rna-NM_001183531.1_MUCL30387 | cds-NP_014755.1_MUCL30387 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005453.1:528886-531174:+ | gene-YOR112W_MUCL30388 | rna-NM_001183531.1_MUCL30388 | cds-NP_014755.1_MUCL30388 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005293.1:518499-520787:+ | gene-YOR112W_MUCL39482 | rna-NM_001183531.1_MUCL39482 | cds-NP_014755.1_MUCL39482 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005437.1:534599-536884:+ | gene-YOR112W_MUCL42920 | rna-NM_001183531.1_MUCL42920 | cds-NP_014755.1_MUCL42920 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011824.1:531397-533682:+ | gene-YOR112W_NCIM3186 | rna-NM_001183531.1_NCIM3186 | cds-NP_014755.1_NCIM3186 | 95.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005277.1:524969-527257:+ | gene-YOR112W_NCYC1407 | rna-NM_001183531.1_NCYC1407 | cds-NP_014755.1_NCYC1407 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994154.1:523967-526255:+ | gene-YOR112W_PE2H3 | rna-NM_001183531.1_PE2H3 | cds-NP_014755.1_PE2H3 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999886.1:534344-536632:+ | gene-YOR112W_PE2H4 | rna-NM_001183531.1_PE2H4 | cds-NP_014755.1_PE2H4 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001147.6:531508-533793:+ | gene-YOR112W_S288C | rna-NM_001183531.1_S288C | cds-NP_014755.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000034.1:61032-63320:+ | gene-YOR112W_SA1 | rna-NM_001183531.1_SA1 | cds-NP_014755.1_SA1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005501.1:514774-517062:+ | gene-YOR112W_ThermosaccDry | rna-NM_001183531.1_ThermosaccDry | cds-NP_014755.1_ThermosaccDry | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005469.1:516894-519182:+ | gene-YOR112W_VR1 | rna-NM_001183531.1_VR1 | cds-NP_014755.1_VR1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000032.1:248762-251050:+ | gene-YOR112W_ZTW1 | rna-NM_001183531.1_ZTW1 | cds-NP_014755.1_ZTW1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047501.1:520829-523114:+ | gene-YOR112W_Sparadoxus | rna-NM_001183531.1_Sparadoxus | cds-NP_014755.1_Sparadoxus | 88.4 | 99.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |