Gene name: CEM1
Reference locus (S288C): YER061C
Gene biotype: protein_coding
Description: 3-oxoacyl-[acyl-carrier-protein] synthase homolog; Mitochondrial beta-keto-acyl synthase; possible role in fatty acid synthesis; required for mitochondrial respiration; human homolog OXSM can complement yeast cem1 null mutant; Belongs to the beta-ketoacyl-ACP synthases family
Top 10 interactors (score): ACP1 (0.996); OAR1 (0.988); FAS2 (0.987); MCT1 (0.98); ETR1 (0.969); FAS1 (0.96); DUR1,2 (0.933); ELO1 (0.864); HFA1 (0.863); LIP2 (0.85); ELO2 (0.828); ELO3 (0.828); FAA2 (0.8); ERG10 (0.776); AIM22 (0.714); TDA1 (0.7); OLE1 (0.694); POX1 (0.693); ACS2 (0.689); SHM2 (0.684)
Homologues (species, bitscore): OXSM (Homo sapiens, 297.4); Oxsm (Mus musculus, 297.4); OXSM (Danio rerio, 291.6); oxsm (Xenopus tropicalis, 288.5); CG12170 (Drosophila melanogaster, 291.6); F10G8.9 (Caenorhabditis elegans, 276.6); AT2G04540 (Arabidopsis thaliana, 313.5)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005299.1:272092-273420:- | gene-YER061C_AKU4011 | rna-NM_001178952.2_AKU4011 | cds-NP_010983.2_AKU4011 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000011.1:152355-153683:+ | gene-YER061C_BG1 | rna-NM_001178952.2_BG1 | cds-NP_010983.2_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005507.1:281404-282732:- | gene-YER061C_Bruggeman | rna-NM_001178952.2_Bruggeman | cds-NP_010983.2_Bruggeman | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005523.1:275047-276375:- | gene-YER061C_CAT1 | rna-NM_001178952.2_CAT1 | cds-NP_010983.2_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005363.1:271948-273276:- | gene-YER061C_CBS1585 | rna-NM_001178952.2_CBS1585 | cds-NP_010983.2_CBS1585 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005347.1:273858-275186:- | gene-YER061C_CBS436 | rna-NM_001178952.2_CBS436 | cds-NP_010983.2_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005331.1:271418-272746:- | gene-YER061C_CBS6412 | rna-NM_001178952.2_CBS6412 | cds-NP_010983.2_CBS6412 | 99.3 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005315.1:277424-278752:- | gene-YER061C_CBS6413 | rna-NM_001178952.2_CBS6413 | cds-NP_010983.2_CBS6413 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001526.1:276151-277479:- | gene-YER061C_CENPK1137D | rna-NM_001178952.2_CENPK1137D | cds-NP_010983.2_CENPK1137D | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005475.1:272432-273760:- | gene-YER061C_EthanolRed | rna-NM_001178952.2_EthanolRed | cds-NP_010983.2_EthanolRed | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005539.1:272885-274213:- | gene-YER061C_FaliES1 | rna-NM_001178952.2_FaliES1 | cds-NP_010983.2_FaliES1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000254.1:304-1632:- | gene-YER061C_JAY291 | rna-NM_001178952.2_JAY291 | cds-NP_010983.2_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005411.1:276841-278169:- | gene-YER061C_MUCL30387 | rna-NM_001178952.2_MUCL30387 | cds-NP_010983.2_MUCL30387 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005443.1:272511-273839:- | gene-YER061C_MUCL30388 | rna-NM_001178952.2_MUCL30388 | cds-NP_010983.2_MUCL30388 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005283.1:270983-272311:- | gene-YER061C_MUCL39482 | rna-NM_001178952.2_MUCL39482 | cds-NP_010983.2_MUCL39482 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005427.1:278039-279367:- | gene-YER061C_MUCL42920 | rna-NM_001178952.2_MUCL42920 | cds-NP_010983.2_MUCL42920 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011814.1:278297-279625:- | gene-YER061C_NCIM3186 | rna-NM_001178952.2_NCIM3186 | cds-NP_010983.2_NCIM3186 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005267.1:276046-277374:- | gene-YER061C_NCYC1407 | rna-NM_001178952.2_NCYC1407 | cds-NP_010983.2_NCYC1407 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994144.1:286699-288027:- | gene-YER061C_PE2H3 | rna-NM_001178952.2_PE2H3 | cds-NP_010983.2_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999876.1:276640-277968:- | gene-YER061C_PE2H4 | rna-NM_001178952.2_PE2H4 | cds-NP_010983.2_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001137.3:278298-279626:- | gene-YER061C_S288C | rna-NM_001178952.2_S288C | cds-NP_010983.2_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000059.1:64817-66145:- | gene-YER061C_SA1 | rna-NM_001178952.2_SA1 | cds-NP_010983.2_SA1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005491.1:273681-275009:- | gene-YER061C_ThermosaccDry | rna-NM_001178952.2_ThermosaccDry | cds-NP_010983.2_ThermosaccDry | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005459.1:273382-274710:- | gene-YER061C_VR1 | rna-NM_001178952.2_VR1 | cds-NP_010983.2_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000009.1:270862-272190:- | gene-YER061C_ZTW1 | rna-NM_001178952.2_ZTW1 | cds-NP_010983.2_ZTW1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047491.1:274800-276128:- | gene-YER061C_Sparadoxus | rna-NM_001178952.2_Sparadoxus | cds-NP_010983.2_Sparadoxus | 88.5 | 99.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |