Gene name: CDC55
Reference locus (S288C): YGL190C
Gene biotype: protein_coding
Description: Regulatory subunit B of protein phosphatase 2A (PP2A); Zds1p/2p-dependent localization to cytoplasm promotes mitotic entry; localization to nucleus prevents mitotic exit; required for correct nuclear division, chromosome segregation during achiasmate meiosis; maintains nucleolar sequestration of Cdc14p during early meiosis; limits formation of PP2A-Rts1p holocomplexes to ensure timely dissolution of sister chromosome cohesion; homolog of mammalian B55
Top 10 interactors (score): RTS1 (0.999); SIT4 (0.999); PPH22 (0.999); PPH21 (0.999); TPD3 (0.999); PPM1 (0.997); NET1 (0.995); PPH3 (0.995); ZDS2 (0.993); YNL217W (0.991); RRD2 (0.99); IGO1 (0.988); GLC7 (0.987); ESP1 (0.987); ZDS1 (0.979); IGO2 (0.979); SWE1 (0.977); CCT5 (0.971); CCT2 (0.971); SLK19 (0.971)
Homologues (species, bitscore): PPP2R2D (Homo sapiens, 453.0); Ppp2r2d (Mus musculus, 454.5); zgc:76887 (Danio rerio, 456.1); ppp2r2b (Xenopus tropicalis, 444.9); tws (Drosophila melanogaster, 449.9); sur-6 (Caenorhabditis elegans, 446.0); PP2AB2 (Arabidopsis thaliana, 449.1)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005301.1:148347-149927:- | gene-YGL190C_AKU4011 | rna-NM_001181055.1_AKU4011 | cds-NP_011325.1_AKU4011 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000132.1:260517-262097:+ | gene-YGL190C_BG1 | rna-NM_001181055.1_BG1 | cds-NP_011325.1_BG1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005509.1:150583-152163:- | gene-YGL190C_Bruggeman | rna-NM_001181055.1_Bruggeman | cds-NP_011325.1_Bruggeman | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005525.1:146445-148025:- | gene-YGL190C_CAT1 | rna-NM_001181055.1_CAT1 | cds-NP_011325.1_CAT1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005365.1:151486-153066:- | gene-YGL190C_CBS1585 | rna-NM_001181055.1_CBS1585 | cds-NP_011325.1_CBS1585 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005349.1:146463-148043:- | gene-YGL190C_CBS436 | rna-NM_001181055.1_CBS436 | cds-NP_011325.1_CBS436 | 99.3 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005333.1:138264-139844:- | gene-YGL190C_CBS6412 | rna-NM_001181055.1_CBS6412 | cds-NP_011325.1_CBS6412 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005317.1:145798-147378:- | gene-YGL190C_CBS6413 | rna-NM_001181055.1_CBS6413 | cds-NP_011325.1_CBS6413 | 99.8 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | False | True |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001528.1:146004-147584:- | gene-YGL190C_CENPK1137D | rna-NM_001181055.1_CENPK1137D | cds-NP_011325.1_CENPK1137D | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005477.1:138330-139910:- | gene-YGL190C_EthanolRed | rna-NM_001181055.1_EthanolRed | cds-NP_011325.1_EthanolRed | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005541.1:139330-140910:- | gene-YGL190C_FaliES1 | rna-NM_001181055.1_FaliES1 | cds-NP_011325.1_FaliES1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000397.1:64654-66234:- | gene-YGL190C_JAY291 | rna-NM_001181055.1_JAY291 | cds-NP_011325.1_JAY291 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005413.1:147819-149399:- | gene-YGL190C_MUCL30387 | rna-NM_001181055.1_MUCL30387 | cds-NP_011325.1_MUCL30387 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005445.1:150920-152500:- | gene-YGL190C_MUCL30388 | rna-NM_001181055.1_MUCL30388 | cds-NP_011325.1_MUCL30388 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005285.1:148496-150076:- | gene-YGL190C_MUCL39482 | rna-NM_001181055.1_MUCL39482 | cds-NP_011325.1_MUCL39482 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005429.1:151126-152706:- | gene-YGL190C_MUCL42920 | rna-NM_001181055.1_MUCL42920 | cds-NP_011325.1_MUCL42920 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011816.1:145809-147389:- | gene-YGL190C_NCIM3186 | rna-NM_001181055.1_NCIM3186 | cds-NP_011325.1_NCIM3186 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005269.1:139977-141557:- | gene-YGL190C_NCYC1407 | rna-NM_001181055.1_NCYC1407 | cds-NP_011325.1_NCYC1407 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994146.1:141966-143546:- | gene-YGL190C_PE2H3 | rna-NM_001181055.1_PE2H3 | cds-NP_011325.1_PE2H3 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999878.1:141514-143094:- | gene-YGL190C_PE2H4 | rna-NM_001181055.1_PE2H4 | cds-NP_011325.1_PE2H4 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001139.9:145809-147389:- | gene-YGL190C_S288C | rna-NM_001181055.1_S288C | cds-NP_011325.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000067.1:5567-7147:- | gene-YGL190C_SA1 | rna-NM_001181055.1_SA1 | cds-NP_011325.1_SA1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005493.1:139592-141172:- | gene-YGL190C_ThermosaccDry | rna-NM_001181055.1_ThermosaccDry | cds-NP_011325.1_ThermosaccDry | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005461.1:146870-148450:- | gene-YGL190C_VR1 | rna-NM_001181055.1_VR1 | cds-NP_011325.1_VR1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000014.1:138129-139709:- | gene-YGL190C_ZTW1 | rna-NM_001181055.1_ZTW1 | cds-NP_011325.1_ZTW1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047493.1:145018-146598:- | gene-YGL190C_Sparadoxus | rna-NM_001181055.1_Sparadoxus | cds-NP_011325.1_Sparadoxus | 95.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |