Gene name: CDC3
Reference locus (S288C): YLR314C
Gene biotype: protein_coding
Description: Cell division control protein 3; Component of the septin ring that is required for cytokinesis; septins are GTP-binding proteins that assemble with other septins into rod-like complexes that can associate with other rods to form filament polymers; septin rings at the mother-bud neck act as scaffolds for recruiting factors needed for cell division and as barriers to prevent diffusion of specific proteins between mother and daughter cells; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin- like GTPase superfamily. Septin GTPase family
Top 10 interactors (score): CDC10 (0.999); CDC12 (0.997); SHS1 (0.996); CDC11 (0.996); GIN4 (0.981); KCC4 (0.966); SPR3 (0.959); HSL1 (0.947); SPR28 (0.929); BNI5 (0.918); YSW1 (0.9); CDC42 (0.899); MYO1 (0.896); BUD4 (0.89); CLA4 (0.89); SMT3 (0.88); ACT1 (0.875); IQG1 (0.86); SIZ1 (0.852); BNI4 (0.85)
Homologues (species, bitscore): SEPT7 (Homo sapiens, 296.6); Sept7 (Mus musculus, 337.0); sept7b (Danio rerio, 341.7); sept7 (Xenopus tropicalis, 340.5); pnut (Drosophila melanogaster, 348.2); unc-61 (Caenorhabditis elegans, 260.4)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005306.1:711026-712588:- | gene-YLR314C_AKU4011 | rna-NM_001182203.2_AKU4011 | cds-NP_013418.2_AKU4011 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000170.1:20054-21616:+ | gene-YLR314C_BG1 | rna-NM_001182203.2_BG1 | cds-NP_013418.2_BG1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005514.1:746857-748419:- | gene-YLR314C_Bruggeman | rna-NM_001182203.2_Bruggeman | cds-NP_013418.2_Bruggeman | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005530.1:745027-746589:- | gene-YLR314C_CAT1 | rna-NM_001182203.2_CAT1 | cds-NP_013418.2_CAT1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005370.1:745953-747515:- | gene-YLR314C_CBS1585 | rna-NM_001182203.2_CBS1585 | cds-NP_013418.2_CBS1585 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005354.1:730552-732114:- | gene-YLR314C_CBS436 | rna-NM_001182203.2_CBS436 | cds-NP_013418.2_CBS436 | 99.3 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005338.1:708593-710155:- | gene-YLR314C_CBS6412 | rna-NM_001182203.2_CBS6412 | cds-NP_013418.2_CBS6412 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005322.1:746614-748176:- | gene-YLR314C_CBS6413 | rna-NM_001182203.2_CBS6413 | cds-NP_013418.2_CBS6413 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001533.1:747186-748748:- | gene-YLR314C_CENPK1137D | rna-NM_001182203.2_CENPK1137D | cds-NP_013418.2_CENPK1137D | 99.6 | 100.0 | Verified | 1 | 1 | 0 | False | False | True | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005482.1:704305-705867:- | gene-YLR314C_EthanolRed | rna-NM_001182203.2_EthanolRed | cds-NP_013418.2_EthanolRed | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005546.1:733505-735067:- | gene-YLR314C_FaliES1 | rna-NM_001182203.2_FaliES1 | cds-NP_013418.2_FaliES1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000296.1:32772-34334:+ | gene-YLR314C_JAY291 | rna-NM_001182203.2_JAY291 | cds-NP_013418.2_JAY291 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005418.1:746086-747648:- | gene-YLR314C_MUCL30387 | rna-NM_001182203.2_MUCL30387 | cds-NP_013418.2_MUCL30387 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005450.1:751669-753231:- | gene-YLR314C_MUCL30388 | rna-NM_001182203.2_MUCL30388 | cds-NP_013418.2_MUCL30388 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005290.1:747182-748744:- | gene-YLR314C_MUCL39482 | rna-NM_001182203.2_MUCL39482 | cds-NP_013418.2_MUCL39482 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005434.1:742335-743897:- | gene-YLR314C_MUCL42920 | rna-NM_001182203.2_MUCL42920 | cds-NP_013418.2_MUCL42920 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011821.1:762549-764111:- | gene-YLR314C_NCIM3186 | rna-NM_001182203.2_NCIM3186 | cds-NP_013418.2_NCIM3186 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005274.1:756524-758086:- | gene-YLR314C_NCYC1407 | rna-NM_001182203.2_NCYC1407 | cds-NP_013418.2_NCYC1407 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994151.1:744319-745881:- | gene-YLR314C_PE2H3 | rna-NM_001182203.2_PE2H3 | cds-NP_013418.2_PE2H3 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999883.1:744063-745625:- | gene-YLR314C_PE2H4 | rna-NM_001182203.2_PE2H4 | cds-NP_013418.2_PE2H4 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001144.5:762575-764137:- | gene-YLR314C_S288C | rna-NM_001182203.2_S288C | cds-NP_013418.2_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000039.1:20162-21724:+ | gene-YLR314C_SA1 | rna-NM_001182203.2_SA1 | cds-NP_013418.2_SA1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005498.1:735399-736961:- | gene-YLR314C_ThermosaccDry | rna-NM_001182203.2_ThermosaccDry | cds-NP_013418.2_ThermosaccDry | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005466.1:747535-749097:- | gene-YLR314C_VR1 | rna-NM_001182203.2_VR1 | cds-NP_013418.2_VR1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000025.1:73820-75382:- | gene-YLR314C_ZTW1 | rna-NM_001182203.2_ZTW1 | cds-NP_013418.2_ZTW1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047498.1:721577-723127:- | gene-YLR314C_Sparadoxus | rna-NM_001182203.2_Sparadoxus | cds-NP_013418.2_Sparadoxus | 91.1 | 99.2 | Verified | 1 | 1 | 1 | False | True | False | False | False |