Gene name: CDC20
Reference locus (S288C): YGL116W
Gene biotype: protein_coding
Description: Ubiquitin-protein transferase activating protein cdc20; Activator of anaphase-promoting complex/cyclosome (APC/C); APC/C is required for metaphase/anaphase transition; directs ubiquitination of mitotic cyclins, Pds1p, and other anaphase inhibitors; cell-cycle regulated; potential Cdc28p substrate; relative distribution to the nucleus increases upon DNA replication stress; Belongs to the WD repeat CDC20/Fizzy family
Top 10 interactors (score): BUB3 (0.999); CDC27 (0.999); CDC23 (0.999); PDS1 (0.999); BUB1 (0.999); MAD2 (0.999); CDC16 (0.999); MAD3 (0.999); APC11 (0.998); CLB2 (0.998); APC2 (0.998); APC1 (0.998); CDC5 (0.997); DOC1 (0.996); CLB5 (0.996); CDC28 (0.995); ESP1 (0.994); CDC14 (0.989); CLB1 (0.984); APC4 (0.983)
Homologues (species, bitscore): CDC20 (Homo sapiens, 260.8); Cdc20 (Mus musculus, 258.5); cdc20 (Danio rerio, 282.7); cdc20 (Xenopus tropicalis, 252.7); fzy (Drosophila melanogaster, 249.6); fzr-1 (Caenorhabditis elegans, 231.5); CDC20.1 (Arabidopsis thaliana, 275.0)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005301.1:293141-294973:+ | gene-YGL116W_AKU4011 | rna-NM_001180981.1_AKU4011 | cds-NP_011399.1_AKU4011 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000132.1:110774-112606:- | gene-YGL116W_BG1 | rna-NM_001180981.1_BG1 | cds-NP_011399.1_BG1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005509.1:295299-297131:+ | gene-YGL116W_Bruggeman | rna-NM_001180981.1_Bruggeman | cds-NP_011399.1_Bruggeman | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005525.1:290820-292652:+ | gene-YGL116W_CAT1 | rna-NM_001180981.1_CAT1 | cds-NP_011399.1_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005365.1:296466-298298:+ | gene-YGL116W_CBS1585 | rna-NM_001180981.1_CBS1585 | cds-NP_011399.1_CBS1585 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005349.1:290770-292602:+ | gene-YGL116W_CBS436 | rna-NM_001180981.1_CBS436 | cds-NP_011399.1_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005333.1:281159-282991:+ | gene-YGL116W_CBS6412 | rna-NM_001180981.1_CBS6412 | cds-NP_011399.1_CBS6412 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005317.1:290758-292590:+ | gene-YGL116W_CBS6413 | rna-NM_001180981.1_CBS6413 | cds-NP_011399.1_CBS6413 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001528.1:289996-291828:+ | gene-YGL116W_CENPK1137D | rna-NM_001180981.1_CENPK1137D | cds-NP_011399.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005477.1:282208-284040:+ | gene-YGL116W_EthanolRed | rna-NM_001180981.1_EthanolRed | cds-NP_011399.1_EthanolRed | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005541.1:284763-286595:+ | gene-YGL116W_FaliES1 | rna-NM_001180981.1_FaliES1 | cds-NP_011399.1_FaliES1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000046.1:15546-17378:- | gene-YGL116W_JAY291 | rna-NM_001180981.1_JAY291 | cds-NP_011399.1_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005413.1:292269-294101:+ | gene-YGL116W_MUCL30387 | rna-NM_001180981.1_MUCL30387 | cds-NP_011399.1_MUCL30387 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005445.1:295361-297193:+ | gene-YGL116W_MUCL30388 | rna-NM_001180981.1_MUCL30388 | cds-NP_011399.1_MUCL30388 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005285.1:292979-294811:+ | gene-YGL116W_MUCL39482 | rna-NM_001180981.1_MUCL39482 | cds-NP_011399.1_MUCL39482 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005429.1:296259-298091:+ | gene-YGL116W_MUCL42920 | rna-NM_001180981.1_MUCL42920 | cds-NP_011399.1_MUCL42920 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011816.1:289809-291641:+ | gene-YGL116W_NCIM3186 | rna-NM_001180981.1_NCIM3186 | cds-NP_011399.1_NCIM3186 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005269.1:284469-286301:+ | gene-YGL116W_NCYC1407 | rna-NM_001180981.1_NCYC1407 | cds-NP_011399.1_NCYC1407 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994146.1:285853-287685:+ | gene-YGL116W_PE2H3 | rna-NM_001180981.1_PE2H3 | cds-NP_011399.1_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999878.1:290851-292683:+ | gene-YGL116W_PE2H4 | rna-NM_001180981.1_PE2H4 | cds-NP_011399.1_PE2H4 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001139.9:289809-291641:+ | gene-YGL116W_S288C | rna-NM_001180981.1_S288C | cds-NP_011399.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000064.1:34602-36434:+ | gene-YGL116W_SA1 | rna-NM_001180981.1_SA1 | cds-NP_011399.1_SA1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005493.1:284975-286807:+ | gene-YGL116W_ThermosaccDry | rna-NM_001180981.1_ThermosaccDry | cds-NP_011399.1_ThermosaccDry | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005461.1:394576-396408:+ | gene-YGL116W_VR1 | rna-NM_001180981.1_VR1 | cds-NP_011399.1_VR1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000014.1:282377-284209:+ | gene-YGL116W_ZTW1 | rna-NM_001180981.1_ZTW1 | cds-NP_011399.1_ZTW1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047493.1:288747-290582:+ | gene-YGL116W_Sparadoxus | rna-NM_001180981.1_Sparadoxus | cds-NP_011399.1_Sparadoxus | 91.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |