Gene name: CDC12
Reference locus (S288C): YHR107C
Gene biotype: protein_coding
Description: Cell division control protein 12; Component of the septin ring that is required for cytokinesis; septins are GTP-binding proteins that assemble into rod-like hetero-oligomers that can associate with other rods to form filaments; septin rings at the mother-bud neck act as scaffolds for recruiting cell division factors and as barriers to prevent diffusion of specific proteins between mother and daughter cells
Top 10 interactors (score): CDC10 (0.998); CDC3 (0.997); CDC11 (0.997); SHS1 (0.996); BUD4 (0.984); GIN4 (0.983); HSL1 (0.969); BNI5 (0.963); AFR1 (0.961); GIC1 (0.949); KCC4 (0.948); GIC2 (0.938); CLA4 (0.934); SPR28 (0.927); SPR3 (0.918); YSW1 (0.904); BNI4 (0.897); SWE1 (0.881); BUD3 (0.88); CDC42 (0.874)
Homologues (species, bitscore): SEPT4 (Homo sapiens, 263.8); Sept7 (Mus musculus, 267.3); sept7b (Danio rerio, 270.0); sept7 (Xenopus tropicalis, 272.3); Sep1 (Drosophila melanogaster, 258.8); unc-59 (Caenorhabditis elegans, 239.2)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005302.1:313733-314956:- | gene-YHR107C_AKU4011 | rna-NM_001179237.1_AKU4011 | cds-NP_011975.1_AKU4011 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000141.1:202953-204176:+ | gene-YHR107C_BG1 | rna-NM_001179237.1_BG1 | cds-NP_011975.1_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005510.1:321027-322250:- | gene-YHR107C_Bruggeman | rna-NM_001179237.1_Bruggeman | cds-NP_011975.1_Bruggeman | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005526.1:316168-317391:- | gene-YHR107C_CAT1 | rna-NM_001179237.1_CAT1 | cds-NP_011975.1_CAT1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005366.1:312756-313979:- | gene-YHR107C_CBS1585 | rna-NM_001179237.1_CBS1585 | cds-NP_011975.1_CBS1585 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005350.1:310111-311334:- | gene-YHR107C_CBS436 | rna-NM_001179237.1_CBS436 | cds-NP_011975.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005334.1:314566-315789:- | gene-YHR107C_CBS6412 | rna-NM_001179237.1_CBS6412 | cds-NP_011975.1_CBS6412 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005318.1:313784-315007:- | gene-YHR107C_CBS6413 | rna-NM_001179237.1_CBS6413 | cds-NP_011975.1_CBS6413 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001529.1:319984-321207:- | gene-YHR107C_CENPK1137D | rna-NM_001179237.1_CENPK1137D | cds-NP_011975.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005478.1:372641-373864:- | gene-YHR107C_EthanolRed | rna-NM_001179237.1_EthanolRed | cds-NP_011975.1_EthanolRed | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005542.1:314129-315352:- | gene-YHR107C_FaliES1 | rna-NM_001179237.1_FaliES1 | cds-NP_011975.1_FaliES1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000045.1:34708-35931:- | gene-YHR107C_JAY291 | rna-NM_001179237.1_JAY291 | cds-NP_011975.1_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005414.1:320751-321974:- | gene-YHR107C_MUCL30387 | rna-NM_001179237.1_MUCL30387 | cds-NP_011975.1_MUCL30387 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005446.1:320405-321628:- | gene-YHR107C_MUCL30388 | rna-NM_001179237.1_MUCL30388 | cds-NP_011975.1_MUCL30388 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005286.1:313097-314320:- | gene-YHR107C_MUCL39482 | rna-NM_001179237.1_MUCL39482 | cds-NP_011975.1_MUCL39482 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005430.1:319343-320566:- | gene-YHR107C_MUCL42920 | rna-NM_001179237.1_MUCL42920 | cds-NP_011975.1_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011817.1:326695-327918:- | gene-YHR107C_NCIM3186 | rna-NM_001179237.1_NCIM3186 | cds-NP_011975.1_NCIM3186 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005270.1:315306-316529:- | gene-YHR107C_NCYC1407 | rna-NM_001179237.1_NCYC1407 | cds-NP_011975.1_NCYC1407 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994147.1:314744-315967:- | gene-YHR107C_PE2H3 | rna-NM_001179237.1_PE2H3 | cds-NP_011975.1_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999879.1:322171-323394:- | gene-YHR107C_PE2H4 | rna-NM_001179237.1_PE2H4 | cds-NP_011975.1_PE2H4 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001140.6:326813-328036:- | gene-YHR107C_S288C | rna-NM_001179237.1_S288C | cds-NP_011975.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000014.1:30940-32163:+ | gene-YHR107C_SA1 | rna-NM_001179237.1_SA1 | cds-NP_011975.1_SA1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005494.1:315212-316435:- | gene-YHR107C_ThermosaccDry | rna-NM_001179237.1_ThermosaccDry | cds-NP_011975.1_ThermosaccDry | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005462.1:322832-324055:- | gene-YHR107C_VR1 | rna-NM_001179237.1_VR1 | cds-NP_011975.1_VR1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000017.1:306248-307471:- | gene-YHR107C_ZTW1 | rna-NM_001179237.1_ZTW1 | cds-NP_011975.1_ZTW1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047494.1:311890-313113:- | gene-YHR107C_Sparadoxus | rna-NM_001179237.1_Sparadoxus | cds-NP_011975.1_Sparadoxus | 91.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |