Gene name: CDC11
Reference locus (S288C): YJR076C
Gene biotype: protein_coding
Description: Cell division control protein 11; Component of the septin ring that is required for cytokinesis; present at the ends of rod-like septin hetero-oligomers; C-terminal extension is important for recruitment of Bni5p to the mother-bud neck, which in turn is required for Myo1p recruitment and cytokinesis; septin rings at the mother-bud neck act as scaffolds for recruiting cell division factors and as barriers to prevent diffusion of specific proteins between mother and daughter cells; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin- like GTPase superfamily. Septin GTPase family
Top 10 interactors (score): CDC12 (0.997); CDC10 (0.996); CDC3 (0.996); BNI5 (0.994); SHS1 (0.992); GIN4 (0.978); SPR28 (0.971); KCC4 (0.965); BUD4 (0.954); HSL1 (0.938); SPR3 (0.921); BNI4 (0.919); YSW1 (0.904); CDC28 (0.88); CLA4 (0.87); ACT1 (0.864); CDC42 (0.84); BEM4 (0.829); ELM1 (0.829); MYO1 (0.813)
Homologues (species, bitscore): SEPT5 (Homo sapiens, 233.4); Sept7 (Mus musculus, 234.2); sept7b (Danio rerio, 241.5); sept7 (Xenopus tropicalis, 236.5); Sep1 (Drosophila melanogaster, 237.7); unc-59 (Caenorhabditis elegans, 216.9)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005304.1:546881-548128:- | gene-YJR076C_AKU4011 | rna-NM_001181734.1_AKU4011 | cds-NP_012610.1_AKU4011 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000190.1:59490-60737:+ | gene-YJR076C_BG1 | rna-NM_001181734.1_BG1 | cds-NP_012610.1_BG1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005512.1:560395-561642:- | gene-YJR076C_Bruggeman | rna-NM_001181734.1_Bruggeman | cds-NP_012610.1_Bruggeman | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005528.1:564703-565950:- | gene-YJR076C_CAT1 | rna-NM_001181734.1_CAT1 | cds-NP_012610.1_CAT1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005368.1:558944-560191:- | gene-YJR076C_CBS1585 | rna-NM_001181734.1_CBS1585 | cds-NP_012610.1_CBS1585 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005352.1:577016-578263:- | gene-YJR076C_CBS436 | rna-NM_001181734.1_CBS436 | cds-NP_012610.1_CBS436 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005336.1:546093-547340:- | gene-YJR076C_CBS6412 | rna-NM_001181734.1_CBS6412 | cds-NP_012610.1_CBS6412 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005320.1:548390-549637:- | gene-YJR076C_CBS6413 | rna-NM_001181734.1_CBS6413 | cds-NP_012610.1_CBS6413 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001531.1:557714-558961:- | gene-YJR076C_CENPK1137D | rna-NM_001181734.1_CENPK1137D | cds-NP_012610.1_CENPK1137D | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005480.1:551273-552520:- | gene-YJR076C_EthanolRed | rna-NM_001181734.1_EthanolRed | cds-NP_012610.1_EthanolRed | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005544.1:562739-563986:- | gene-YJR076C_FaliES1 | rna-NM_001181734.1_FaliES1 | cds-NP_012610.1_FaliES1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000054.1:125397-126644:+ | gene-YJR076C_JAY291 | rna-NM_001181734.1_JAY291 | cds-NP_012610.1_JAY291 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005416.1:560924-562171:- | gene-YJR076C_MUCL30387 | rna-NM_001181734.1_MUCL30387 | cds-NP_012610.1_MUCL30387 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005448.1:558219-559466:- | gene-YJR076C_MUCL30388 | rna-NM_001181734.1_MUCL30388 | cds-NP_012610.1_MUCL30388 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005288.1:552406-553653:- | gene-YJR076C_MUCL39482 | rna-NM_001181734.1_MUCL39482 | cds-NP_012610.1_MUCL39482 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005432.1:556650-557897:- | gene-YJR076C_MUCL42920 | rna-NM_001181734.1_MUCL42920 | cds-NP_012610.1_MUCL42920 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011819.1:575333-576580:- | gene-YJR076C_NCIM3186 | rna-NM_001181734.1_NCIM3186 | cds-NP_012610.1_NCIM3186 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005272.1:549971-551218:- | gene-YJR076C_NCYC1407 | rna-NM_001181734.1_NCYC1407 | cds-NP_012610.1_NCYC1407 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994149.1:567862-569109:- | gene-YJR076C_PE2H3 | rna-NM_001181734.1_PE2H3 | cds-NP_012610.1_PE2H3 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999881.1:561557-562804:- | gene-YJR076C_PE2H4 | rna-NM_001181734.1_PE2H4 | cds-NP_012610.1_PE2H4 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001142.9:575354-576601:- | gene-YJR076C_S288C | rna-NM_001181734.1_S288C | cds-NP_012610.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000038.1:33935-35182:- | gene-YJR076C_SA1 | rna-NM_001181734.1_SA1 | cds-NP_012610.1_SA1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005496.1:556671-557918:- | gene-YJR076C_ThermosaccDry | rna-NM_001181734.1_ThermosaccDry | cds-NP_012610.1_ThermosaccDry | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005464.1:558849-560096:- | gene-YJR076C_VR1 | rna-NM_001181734.1_VR1 | cds-NP_012610.1_VR1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000021.1:536069-537316:- | gene-YJR076C_ZTW1 | rna-NM_001181734.1_ZTW1 | cds-NP_012610.1_ZTW1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047496.1:569448-570695:- | gene-YJR076C_Sparadoxus | rna-NM_001181734.1_Sparadoxus | cds-NP_012610.1_Sparadoxus | 93.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |