Gene name: CDC10
Reference locus (S288C): YCR002C
Gene biotype: protein_coding
Description: Cell division control protein 10; Component of the septin ring, required for cytokinesis; septins are GTP-binding proteins that assemble into rod-like hetero-oligomers that can associate to form filaments; septin rings at the mother-bud neck act as scaffolds for recruiting cell division factors and as barriers to prevent diffusion of specific proteins between mother and daughter cells; N-terminus interacts with phosphatidylinositol-4,5-bisphosphate; protein abundance increases under DNA damage stress
Top 10 interactors (score): CDC3 (0.999); CDC12 (0.998); CDC11 (0.996); GIN4 (0.98); SHS1 (0.973); SPR3 (0.965); KCC4 (0.96); SPR28 (0.953); BUD4 (0.947); BNI4 (0.926); YSW1 (0.907); HSL1 (0.869); CDC42 (0.837); BNI5 (0.835); HOF1 (0.832); CLA4 (0.818); BNI1 (0.797); BUD3 (0.71); SYP1 (0.695); YIL108W (0.692)
Homologues (species, bitscore): SEPT9 (Homo sapiens, 292.4); Sept9 (Mus musculus, 290.4); sept9a (Danio rerio, 294.3); sept3 (Xenopus tropicalis, 285.0); pnut (Drosophila melanogaster, 255.8); unc-59 (Caenorhabditis elegans, 222.6)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005297.1:112089-113057:- | gene-YCR002C_AKU4011 | rna-NM_001178715.1_AKU4011 | cds-NP_009928.1_AKU4011 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000178.1:32973-33941:+ | gene-YCR002C_BG1 | rna-NM_001178715.1_BG1 | cds-NP_009928.1_BG1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005505.1:107903-108871:- | gene-YCR002C_Bruggeman | rna-NM_001178715.1_Bruggeman | cds-NP_009928.1_Bruggeman | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005521.1:111837-112805:- | gene-YCR002C_CAT1 | rna-NM_001178715.1_CAT1 | cds-NP_009928.1_CAT1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005361.1:112738-113706:- | gene-YCR002C_CBS1585 | rna-NM_001178715.1_CBS1585 | cds-NP_009928.1_CBS1585 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005345.1:117663-118631:- | gene-YCR002C_CBS436 | rna-NM_001178715.1_CBS436 | cds-NP_009928.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005329.1:100198-101166:- | gene-YCR002C_CBS6412 | rna-NM_001178715.1_CBS6412 | cds-NP_009928.1_CBS6412 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005313.1:112045-113013:- | gene-YCR002C_CBS6413 | rna-NM_001178715.1_CBS6413 | cds-NP_009928.1_CBS6413 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001524.1:116855-117823:- | gene-YCR002C_CENPK1137D | rna-NM_001178715.1_CENPK1137D | cds-NP_009928.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005473.1:110107-111075:- | gene-YCR002C_EthanolRed | rna-NM_001178715.1_EthanolRed | cds-NP_009928.1_EthanolRed | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005537.1:112405-113373:- | gene-YCR002C_FaliES1 | rna-NM_001178715.1_FaliES1 | cds-NP_009928.1_FaliES1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000126.1:26578-27546:- | gene-YCR002C_JAY291 | rna-NM_001178715.1_JAY291 | cds-NP_009928.1_JAY291 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005409.1:105120-106088:- | gene-YCR002C_MUCL30387 | rna-NM_001178715.1_MUCL30387 | cds-NP_009928.1_MUCL30387 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005441.1:104676-105644:- | gene-YCR002C_MUCL30388 | rna-NM_001178715.1_MUCL30388 | cds-NP_009928.1_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005281.1:113155-114123:- | gene-YCR002C_MUCL39482 | rna-NM_001178715.1_MUCL39482 | cds-NP_009928.1_MUCL39482 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005425.1:108395-109363:- | gene-YCR002C_MUCL42920 | rna-NM_001178715.1_MUCL42920 | cds-NP_009928.1_MUCL42920 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011812.1:117012-117980:- | gene-YCR002C_NCIM3186 | rna-NM_001178715.1_NCIM3186 | cds-NP_009928.1_NCIM3186 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005265.1:113638-114606:- | gene-YCR002C_NCYC1407 | rna-NM_001178715.1_NCYC1407 | cds-NP_009928.1_NCYC1407 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994142.1:117810-118778:- | gene-YCR002C_PE2H3 | rna-NM_001178715.1_PE2H3 | cds-NP_009928.1_PE2H3 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999874.1:117774-118742:- | gene-YCR002C_PE2H4 | rna-NM_001178715.1_PE2H4 | cds-NP_009928.1_PE2H4 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001135.5:117380-118348:- | gene-YCR002C_S288C | rna-NM_001178715.1_S288C | cds-NP_009928.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000073.1:32985-33953:+ | gene-YCR002C_SA1 | rna-NM_001178715.1_SA1 | cds-NP_009928.1_SA1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005489.1:112973-113941:- | gene-YCR002C_ThermosaccDry | rna-NM_001178715.1_ThermosaccDry | cds-NP_009928.1_ThermosaccDry | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005457.1:123644-124612:- | gene-YCR002C_VR1 | rna-NM_001178715.1_VR1 | cds-NP_009928.1_VR1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000004.1:111909-112877:- | gene-YCR002C_ZTW1 | rna-NM_001178715.1_ZTW1 | cds-NP_009928.1_ZTW1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047489.1:142763-143731:- | gene-YCR002C_Sparadoxus | rna-NM_001178715.1_Sparadoxus | cds-NP_009928.1_Sparadoxus | 93.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |