Gene name: CCT5
Reference locus (S288C): YJR064W
Gene biotype: protein_coding
Description: T-complex protein 1 subunit epsilon; Subunit of the cytosolic chaperonin Cct ring complex; related to Tcp1p, required for the assembly of actin and tubulins in vivo
Top 10 interactors (score): CCT3 (0.999); CCT2 (0.999); TCP1 (0.999); CCT4 (0.999); CCT7 (0.999); CCT8 (0.999); CCT6 (0.999); CDC55 (0.971); PPH22 (0.963); PPH21 (0.963); RVB1 (0.947); SUI2 (0.945); GCD11 (0.936); RPL15A (0.934); RPL3 (0.933); PRT1 (0.933); ASC1 (0.931); RPL15B (0.931); RPL4B (0.928); RPL4A (0.928)
Homologues (species, bitscore): CCT5 (Homo sapiens, 693.3); Cct5 (Mus musculus, 686.8); cct5 (Danio rerio, 691.8); cct5 (Xenopus tropicalis, 692.2); Cct5 (Drosophila melanogaster, 669.8); cct-5 (Caenorhabditis elegans, 664.8); AT1G24510 (Arabidopsis thaliana, 631.3)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005304.1:527440-529128:+ | gene-YJR064W_AKU4011 | rna-NM_001181722.1_AKU4011 | cds-NP_012598.1_AKU4011 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000190.1:78494-80182:- | gene-YJR064W_BG1 | rna-NM_001181722.1_BG1 | cds-NP_012598.1_BG1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005512.1:540950-542638:+ | gene-YJR064W_Bruggeman | rna-NM_001181722.1_Bruggeman | cds-NP_012598.1_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005528.1:545260-546948:+ | gene-YJR064W_CAT1 | rna-NM_001181722.1_CAT1 | cds-NP_012598.1_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005368.1:539504-541192:+ | gene-YJR064W_CBS1585 | rna-NM_001181722.1_CBS1585 | cds-NP_012598.1_CBS1585 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005352.1:557576-559264:+ | gene-YJR064W_CBS436 | rna-NM_001181722.1_CBS436 | cds-NP_012598.1_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005336.1:526653-528341:+ | gene-YJR064W_CBS6412 | rna-NM_001181722.1_CBS6412 | cds-NP_012598.1_CBS6412 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005320.1:528951-530639:+ | gene-YJR064W_CBS6413 | rna-NM_001181722.1_CBS6413 | cds-NP_012598.1_CBS6413 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001531.1:538274-539962:+ | gene-YJR064W_CENPK1137D | rna-NM_001181722.1_CENPK1137D | cds-NP_012598.1_CENPK1137D | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005480.1:531834-533522:+ | gene-YJR064W_EthanolRed | rna-NM_001181722.1_EthanolRed | cds-NP_012598.1_EthanolRed | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005544.1:543300-544988:+ | gene-YJR064W_FaliES1 | rna-NM_001181722.1_FaliES1 | cds-NP_012598.1_FaliES1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000054.1:144402-146090:- | gene-YJR064W_JAY291 | rna-NM_001181722.1_JAY291 | cds-NP_012598.1_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005416.1:541486-543174:+ | gene-YJR064W_MUCL30387 | rna-NM_001181722.1_MUCL30387 | cds-NP_012598.1_MUCL30387 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005448.1:538772-540460:+ | gene-YJR064W_MUCL30388 | rna-NM_001181722.1_MUCL30388 | cds-NP_012598.1_MUCL30388 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005288.1:532966-534654:+ | gene-YJR064W_MUCL39482 | rna-NM_001181722.1_MUCL39482 | cds-NP_012598.1_MUCL39482 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005432.1:537203-538891:+ | gene-YJR064W_MUCL42920 | rna-NM_001181722.1_MUCL42920 | cds-NP_012598.1_MUCL42920 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011819.1:555893-557581:+ | gene-YJR064W_NCIM3186 | rna-NM_001181722.1_NCIM3186 | cds-NP_012598.1_NCIM3186 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005272.1:530530-532218:+ | gene-YJR064W_NCYC1407 | rna-NM_001181722.1_NCYC1407 | cds-NP_012598.1_NCYC1407 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994149.1:548423-550111:+ | gene-YJR064W_PE2H3 | rna-NM_001181722.1_PE2H3 | cds-NP_012598.1_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999881.1:542119-543807:+ | gene-YJR064W_PE2H4 | rna-NM_001181722.1_PE2H4 | cds-NP_012598.1_PE2H4 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001142.9:555914-557602:+ | gene-YJR064W_S288C | rna-NM_001181722.1_S288C | cds-NP_012598.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000038.1:14489-16177:+ | gene-YJR064W_SA1 | rna-NM_001181722.1_SA1 | cds-NP_012598.1_SA1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005496.1:537232-538920:+ | gene-YJR064W_ThermosaccDry | rna-NM_001181722.1_ThermosaccDry | cds-NP_012598.1_ThermosaccDry | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005464.1:539109-540797:+ | gene-YJR064W_VR1 | rna-NM_001181722.1_VR1 | cds-NP_012598.1_VR1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000021.1:516627-518315:+ | gene-YJR064W_ZTW1 | rna-NM_001181722.1_ZTW1 | cds-NP_012598.1_ZTW1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047496.1:549979-551667:+ | gene-YJR064W_Sparadoxus | rna-NM_001181722.1_Sparadoxus | cds-NP_012598.1_Sparadoxus | 93.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |