Gene name: CCT2
Reference locus (S288C): YIL142W
Gene biotype: protein_coding
Description: T-complex protein 1 subunit beta; Subunit beta of the cytosolic chaperonin Cct ring complex; related to Tcp1p, required for the assembly of actin and tubulins in vivo
Top 10 interactors (score): CCT5 (0.999); CCT6 (0.999); CCT8 (0.999); CCT7 (0.999); CCT4 (0.999); CCT3 (0.999); TCP1 (0.999); CDC55 (0.971); FAR8 (0.962); PPH22 (0.961); PPH21 (0.961); SUI2 (0.953); GCD11 (0.939); ARX1 (0.926); RPL16B (0.918); RPS3 (0.917); TEF4 (0.917); CAM1 (0.916); PRE10 (0.916); NOP58 (0.915)
Homologues (species, bitscore): CCT2 (Homo sapiens, 698.4); Cct2 (Mus musculus, 696.0); cct2 (Danio rerio, 367.9); cct2 (Xenopus tropicalis, 654.1); CG7033 (Drosophila melanogaster, 671.4); cct-2 (Caenorhabditis elegans, 651.0); AT5G20890 (Arabidopsis thaliana, 668.3)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005303.1:84521-86104:+ | gene-YIL142W_AKU4011 | rna-NM_001179490.1_AKU4011 | cds-NP_012124.1_AKU4011 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000174.1:51259-52842:- | gene-YIL142W_BG1 | rna-NM_001179490.1_BG1 | cds-NP_012124.1_BG1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005511.1:87278-88861:+ | gene-YIL142W_Bruggeman | rna-NM_001179490.1_Bruggeman | cds-NP_012124.1_Bruggeman | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005527.1:81090-82673:+ | gene-YIL142W_CAT1 | rna-NM_001179490.1_CAT1 | cds-NP_012124.1_CAT1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005367.1:84724-86307:+ | gene-YIL142W_CBS1585 | rna-NM_001179490.1_CBS1585 | cds-NP_012124.1_CBS1585 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005351.1:75864-77447:+ | gene-YIL142W_CBS436 | rna-NM_001179490.1_CBS436 | cds-NP_012124.1_CBS436 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005335.1:82254-83837:+ | gene-YIL142W_CBS6412 | rna-NM_001179490.1_CBS6412 | cds-NP_012124.1_CBS6412 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005319.1:76409-77992:+ | gene-YIL142W_CBS6413 | rna-NM_001179490.1_CBS6413 | cds-NP_012124.1_CBS6413 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001530.1:75004-76587:+ | gene-YIL142W_CENPK1137D | rna-NM_001179490.1_CENPK1137D | cds-NP_012124.1_CENPK1137D | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005479.1:70057-71640:+ | gene-YIL142W_EthanolRed | rna-NM_001179490.1_EthanolRed | cds-NP_012124.1_EthanolRed | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005543.1:85860-87443:+ | gene-YIL142W_FaliES1 | rna-NM_001179490.1_FaliES1 | cds-NP_012124.1_FaliES1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000319.1:20912-22495:- | gene-YIL142W_JAY291 | rna-NM_001179490.1_JAY291 | cds-NP_012124.1_JAY291 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005415.1:85039-86622:+ | gene-YIL142W_MUCL30387 | rna-NM_001179490.1_MUCL30387 | cds-NP_012124.1_MUCL30387 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005447.1:84718-86301:+ | gene-YIL142W_MUCL30388 | rna-NM_001179490.1_MUCL30388 | cds-NP_012124.1_MUCL30388 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005287.1:85650-87233:+ | gene-YIL142W_MUCL39482 | rna-NM_001179490.1_MUCL39482 | cds-NP_012124.1_MUCL39482 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005431.1:88851-90434:+ | gene-YIL142W_MUCL42920 | rna-NM_001179490.1_MUCL42920 | cds-NP_012124.1_MUCL42920 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011818.1:83302-84885:+ | gene-YIL142W_NCIM3186 | rna-NM_001179490.1_NCIM3186 | cds-NP_012124.1_NCIM3186 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005271.1:89615-91198:+ | gene-YIL142W_NCYC1407 | rna-NM_001179490.1_NCYC1407 | cds-NP_012124.1_NCYC1407 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994148.1:84237-85820:+ | gene-YIL142W_PE2H3 | rna-NM_001179490.1_PE2H3 | cds-NP_012124.1_PE2H3 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999880.1:78199-79782:+ | gene-YIL142W_PE2H4 | rna-NM_001179490.1_PE2H4 | cds-NP_012124.1_PE2H4 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001141.2:83302-84885:+ | gene-YIL142W_S288C | rna-NM_001179490.1_S288C | cds-NP_012124.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000050.1:61877-63460:+ | gene-YIL142W_SA1 | rna-NM_001179490.1_SA1 | cds-NP_012124.1_SA1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005495.1:84470-86053:+ | gene-YIL142W_ThermosaccDry | rna-NM_001179490.1_ThermosaccDry | cds-NP_012124.1_ThermosaccDry | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005463.1:81627-83210:+ | gene-YIL142W_VR1 | rna-NM_001179490.1_VR1 | cds-NP_012124.1_VR1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000019.1:59451-61034:+ | gene-YIL142W_ZTW1 | rna-NM_001179490.1_ZTW1 | cds-NP_012124.1_ZTW1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047495.1:77242-78825:+ | gene-YIL142W_Sparadoxus | rna-NM_001179490.1_Sparadoxus | cds-NP_012124.1_Sparadoxus | 92.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |