Gene name: CBT1
Reference locus (S288C): YKL208W
Gene biotype: protein_coding
Description: Cytochrome b termination protein 1; Protein involved in 5' RNA end processing; substrates include mitochondrial COB, 15S_rRNA, and RPM1 transcripts; may also have a role in 3' end processing of the COB pre-mRNA; displays genetic interaction with cell cycle-regulated kinase Dbf2p
Top 10 interactors (score): CBP2 (0.802); CBS2 (0.78); BI3 (0.78); CBS1 (0.78); BI2 (0.78); CBP1 (0.78); COX16 (0.76); PET54 (0.716); COX9 (0.713); COQ9 (0.698); PET112 (0.697); MRPS16 (0.695); SOM1 (0.694); COX11 (0.691); MNE1 (0.658); ATP15 (0.655); COX8 (0.651); CCM1 (0.651); PET309 (0.618); SCO2 (0.618)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005305.1:33471-34286:+ | gene-YKL208W_AKU4011 | rna-NM_001179773.1_AKU4011 | cds-NP_012714.1_AKU4011 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000030.1:10555-11370:+ | gene-YKL208W_BG1 | rna-NM_001179773.1_BG1 | cds-NP_012714.1_BG1 | 98.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005513.1:51143-51958:+ | gene-YKL208W_Bruggeman | rna-NM_001179773.1_Bruggeman | cds-NP_012714.1_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005529.1:46334-47149:+ | gene-YKL208W_CAT1 | rna-NM_001179773.1_CAT1 | cds-NP_012714.1_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005369.1:45483-46298:+ | gene-YKL208W_CBS1585 | rna-NM_001179773.1_CBS1585 | cds-NP_012714.1_CBS1585 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005353.1:44684-45499:+ | gene-YKL208W_CBS436 | rna-NM_001179773.1_CBS436 | cds-NP_012714.1_CBS436 | 98.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005337.1:30740-31555:+ | gene-YKL208W_CBS6412 | rna-NM_001179773.1_CBS6412 | cds-NP_012714.1_CBS6412 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005321.1:46120-46935:+ | gene-YKL208W_CBS6413 | rna-NM_001179773.1_CBS6413 | cds-NP_012714.1_CBS6413 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001532.1:46935-47750:+ | gene-YKL208W_CENPK1137D | rna-NM_001179773.1_CENPK1137D | cds-NP_012714.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005481.1:44954-45769:+ | gene-YKL208W_EthanolRed | rna-NM_001179773.1_EthanolRed | cds-NP_012714.1_EthanolRed | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005545.1:45013-45828:+ | gene-YKL208W_FaliES1 | rna-NM_001179773.1_FaliES1 | cds-NP_012714.1_FaliES1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000006.2:44627-45442:+ | gene-YKL208W_JAY291 | rna-NM_001179773.1_JAY291 | cds-NP_012714.1_JAY291 | 98.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005417.1:53678-54493:+ | gene-YKL208W_MUCL30387 | rna-NM_001179773.1_MUCL30387 | cds-NP_012714.1_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005449.1:47766-48581:+ | gene-YKL208W_MUCL30388 | rna-NM_001179773.1_MUCL30388 | cds-NP_012714.1_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005289.1:45540-46355:+ | gene-YKL208W_MUCL39482 | rna-NM_001179773.1_MUCL39482 | cds-NP_012714.1_MUCL39482 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005433.1:48834-49649:+ | gene-YKL208W_MUCL42920 | rna-NM_001179773.1_MUCL42920 | cds-NP_012714.1_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011820.1:47146-47961:+ | gene-YKL208W_NCIM3186 | rna-NM_001179773.1_NCIM3186 | cds-NP_012714.1_NCIM3186 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005273.1:45564-46379:+ | gene-YKL208W_NCYC1407 | rna-NM_001179773.1_NCYC1407 | cds-NP_012714.1_NCYC1407 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994150.1:53262-54077:+ | gene-YKL208W_PE2H3 | rna-NM_001179773.1_PE2H3 | cds-NP_012714.1_PE2H3 | 98.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999882.1:49460-50275:+ | gene-YKL208W_PE2H4 | rna-NM_001179773.1_PE2H4 | cds-NP_012714.1_PE2H4 | 98.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001143.9:47157-47972:+ | gene-YKL208W_S288C | rna-NM_001179773.1_S288C | cds-NP_012714.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000092.1:19901-20716:- | gene-YKL208W_SA1 | rna-NM_001179773.1_SA1 | cds-NP_012714.1_SA1 | 98.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005497.1:45761-46576:+ | gene-YKL208W_ThermosaccDry | rna-NM_001179773.1_ThermosaccDry | cds-NP_012714.1_ThermosaccDry | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005465.1:44866-45681:+ | gene-YKL208W_VR1 | rna-NM_001179773.1_VR1 | cds-NP_012714.1_VR1 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000022.1:44675-45490:+ | gene-YKL208W_ZTW1 | rna-NM_001179773.1_ZTW1 | cds-NP_012714.1_ZTW1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047497.1:53420-54235:+ | gene-YKL208W_Sparadoxus | rna-NM_001179773.1_Sparadoxus | cds-NP_012714.1_Sparadoxus | 85.9 | 99.6 | Verified | 1 | 1 | 1 | False | True | False | False | False |