Gene name: CBR1
Reference locus (S288C): YIL043C
Gene biotype: protein_coding
Description: NADH-cytochrome b5 reductase 1; Cytochrome b reductase; not essential for viability; also detected in mitochondria; mutation in conserved NADH binding domain of the human ortholog results in type I methemoglobinemia
Top 10 interactors (score): NCP1 (0.926); CYB5 (0.8); STE20 (0.708); NIT3 (0.704); YMR122W-A (0.666); PTH2 (0.655); OLE1 (0.653); YFL051C (0.651); LYS2 (0.649); ERG11 (0.629); URA1 (0.624); CYB2 (0.607); TPC1 (0.605); AIF1 (0.576); FMP42 (0.573); BOL1 (0.569); YGR021W (0.565); SCS7 (0.564); YJR061W (0.561); KTI11 (0.553)
Homologues (species, bitscore): CYB5R2 (Homo sapiens, 184.5); Cyb5r1 (Mus musculus, 186.8); cyb5r2 (Danio rerio, 178.3); cyb5r2 (Xenopus tropicalis, 203.8); CG5946 (Drosophila melanogaster, 165.6); T05H4.4 (Caenorhabditis elegans, 184.1); CBR (Arabidopsis thaliana, 217.2)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005303.1:270900-271754:- | gene-YIL043C_AKU4011 | rna-NM_001179393.1_AKU4011 | cds-NP_012221.2_AKU4011 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000164.1:132337-133191:- | gene-YIL043C_BG1 | rna-NM_001179393.1_BG1 | cds-NP_012221.2_BG1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005511.1:277169-278023:- | gene-YIL043C_Bruggeman | rna-NM_001179393.1_Bruggeman | cds-NP_012221.2_Bruggeman | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005527.1:265071-265925:- | gene-YIL043C_CAT1 | rna-NM_001179393.1_CAT1 | cds-NP_012221.2_CAT1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005367.1:270725-271579:- | gene-YIL043C_CBS1585 | rna-NM_001179393.1_CBS1585 | cds-NP_012221.2_CBS1585 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005351.1:266045-266899:- | gene-YIL043C_CBS436 | rna-NM_001179393.1_CBS436 | cds-NP_012221.2_CBS436 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005335.1:267340-268194:- | gene-YIL043C_CBS6412 | rna-NM_001179393.1_CBS6412 | cds-NP_012221.2_CBS6412 | 99.2 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005319.1:262891-263745:- | gene-YIL043C_CBS6413 | rna-NM_001179393.1_CBS6413 | cds-NP_012221.2_CBS6413 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001530.1:265985-266839:- | gene-YIL043C_CENPK1137D | rna-NM_001179393.1_CENPK1137D | cds-NP_012221.2_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005479.1:254814-255668:- | gene-YIL043C_EthanolRed | rna-NM_001179393.1_EthanolRed | cds-NP_012221.2_EthanolRed | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005543.1:272353-273207:- | gene-YIL043C_FaliES1 | rna-NM_001179393.1_FaliES1 | cds-NP_012221.2_FaliES1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000365.1:25663-26517:+ | gene-YIL043C_JAY291 | rna-NM_001179393.1_JAY291 | cds-NP_012221.2_JAY291 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005415.1:274017-274871:- | gene-YIL043C_MUCL30387 | rna-NM_001179393.1_MUCL30387 | cds-NP_012221.2_MUCL30387 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005447.1:270620-271474:- | gene-YIL043C_MUCL30388 | rna-NM_001179393.1_MUCL30388 | cds-NP_012221.2_MUCL30388 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005287.1:271568-272422:- | gene-YIL043C_MUCL39482 | rna-NM_001179393.1_MUCL39482 | cds-NP_012221.2_MUCL39482 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005431.1:274712-275566:- | gene-YIL043C_MUCL42920 | rna-NM_001179393.1_MUCL42920 | cds-NP_012221.2_MUCL42920 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011818.1:274072-274926:- | gene-YIL043C_NCIM3186 | rna-NM_001179393.1_NCIM3186 | cds-NP_012221.2_NCIM3186 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005271.1:275841-276695:- | gene-YIL043C_NCYC1407 | rna-NM_001179393.1_NCYC1407 | cds-NP_012221.2_NCYC1407 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994148.1:269099-269953:- | gene-YIL043C_PE2H3 | rna-NM_001179393.1_PE2H3 | cds-NP_012221.2_PE2H3 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999880.1:263805-264659:- | gene-YIL043C_PE2H4 | rna-NM_001179393.1_PE2H4 | cds-NP_012221.2_PE2H4 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001141.2:274072-274926:- | gene-YIL043C_S288C | rna-NM_001179393.1_S288C | cds-NP_012221.2_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000031.1:51234-52088:+ | gene-YIL043C_SA1 | rna-NM_001179393.1_SA1 | cds-NP_012221.2_SA1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005495.1:271022-271876:- | gene-YIL043C_ThermosaccDry | rna-NM_001179393.1_ThermosaccDry | cds-NP_012221.2_ThermosaccDry | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005463.1:268207-269061:- | gene-YIL043C_VR1 | rna-NM_001179393.1_VR1 | cds-NP_012221.2_VR1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000019.1:244876-245730:- | gene-YIL043C_ZTW1 | rna-NM_001179393.1_ZTW1 | cds-NP_012221.2_ZTW1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047495.1:266962-267816:- | gene-YIL043C_Sparadoxus | rna-NM_001179393.1_Sparadoxus | cds-NP_012221.2_Sparadoxus | 93.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |