Gene name: CBP6
Reference locus (S288C): YBR120C
Gene biotype: protein_coding
Description: Cytochrome B pre-mRNA-processing protein 6; Mitochondrial protein required for translation of the COB mRNA; forms a complex with Cbp3p that binds to mt ribosomes near the polypeptide tunnel exit and promotes efficient translation of the COB mRNA; Cbp3p-Cbp6p complex also interacts with newly synthesized cytochrome b (Cobp) and Cbp4p to promote assembly of Cobp into the cytochrome bc1 complex; Cbp3p-Cbp6p complex is sequestered if assembly of Complex III is blocked, downregulating COB mRNA translation
Top 10 interactors (score): CBP3 (0.987); PUF3 (0.851); CBS2 (0.847); CBS1 (0.813); CBP4 (0.806); COB (0.784); INA22 (0.757); SRO9 (0.721); COX17 (0.72); MRPL4 (0.717); YBL012C (0.712); YBR071W (0.712); PAN5 (0.692); YBL044W (0.678); MSS51 (0.671); ECM15 (0.671); YBL083C (0.657); MBA1 (0.647); YBR300C (0.636); COX1 (0.621)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005296.1:463317-463805:- | gene-YBR120C_AKU4011 | rna-NM_001178468.3_AKU4011 | cds-NP_009678.3_AKU4011 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000179.1:453857-454345:- | gene-YBR120C_BG1 | rna-NM_001178468.3_BG1 | cds-NP_009678.3_BG1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005504.1:465093-465581:- | gene-YBR120C_Bruggeman | rna-NM_001178468.3_Bruggeman | cds-NP_009678.3_Bruggeman | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005520.1:468260-468748:- | gene-YBR120C_CAT1 | rna-NM_001178468.3_CAT1 | cds-NP_009678.3_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005360.1:455101-455589:- | gene-YBR120C_CBS1585 | rna-NM_001178468.3_CBS1585 | cds-NP_009678.3_CBS1585 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005344.1:463172-463660:- | gene-YBR120C_CBS436 | rna-NM_001178468.3_CBS436 | cds-NP_009678.3_CBS436 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005328.1:552964-553452:- | gene-YBR120C_CBS6412 | rna-NM_001178468.3_CBS6412 | cds-NP_009678.3_CBS6412 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005312.1:460729-461217:- | gene-YBR120C_CBS6413 | rna-NM_001178468.3_CBS6413 | cds-NP_009678.3_CBS6413 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001523.1:474207-474695:- | gene-YBR120C_CENPK1137D | rna-NM_001178468.3_CENPK1137D | cds-NP_009678.3_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005472.1:589339-589827:- | gene-YBR120C_EthanolRed | rna-NM_001178468.3_EthanolRed | cds-NP_009678.3_EthanolRed | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005536.1:479356-479844:- | gene-YBR120C_FaliES1 | rna-NM_001178468.3_FaliES1 | cds-NP_009678.3_FaliES1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000444.1:2762-3250:- | gene-YBR120C_JAY291 | rna-NM_001178468.3_JAY291 | cds-NP_009678.3_JAY291 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005408.1:468001-468489:- | gene-YBR120C_MUCL30387 | rna-NM_001178468.3_MUCL30387 | cds-NP_009678.3_MUCL30387 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005440.1:466353-466841:- | gene-YBR120C_MUCL30388 | rna-NM_001178468.3_MUCL30388 | cds-NP_009678.3_MUCL30388 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005280.1:453494-453982:- | gene-YBR120C_MUCL39482 | rna-NM_001178468.3_MUCL39482 | cds-NP_009678.3_MUCL39482 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005424.1:463408-463896:- | gene-YBR120C_MUCL42920 | rna-NM_001178468.3_MUCL42920 | cds-NP_009678.3_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011811.1:480232-480720:- | gene-YBR120C_NCIM3186 | rna-NM_001178468.3_NCIM3186 | cds-NP_009678.3_NCIM3186 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005264.1:456022-456510:- | gene-YBR120C_NCYC1407 | rna-NM_001178468.3_NCYC1407 | cds-NP_009678.3_NCYC1407 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994141.1:468600-469088:- | gene-YBR120C_PE2H3 | rna-NM_001178468.3_PE2H3 | cds-NP_009678.3_PE2H3 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999873.1:466276-466764:- | gene-YBR120C_PE2H4 | rna-NM_001178468.3_PE2H4 | cds-NP_009678.3_PE2H4 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001134.8:480435-480923:- | gene-YBR120C_S288C | rna-NM_001178468.3_S288C | cds-NP_009678.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000032.1:1546-2034:- | gene-YBR120C_SA1 | rna-NM_001178468.3_SA1 | cds-NP_009678.3_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005488.1:478363-478851:- | gene-YBR120C_ThermosaccDry | rna-NM_001178468.3_ThermosaccDry | cds-NP_009678.3_ThermosaccDry | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005456.1:459867-460355:- | gene-YBR120C_VR1 | rna-NM_001178468.3_VR1 | cds-NP_009678.3_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000003.1:453510-453998:- | gene-YBR120C_ZTW1 | rna-NM_001178468.3_ZTW1 | cds-NP_009678.3_ZTW1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047488.1:490719-491207:- | gene-YBR120C_Sparadoxus | rna-NM_001178468.3_Sparadoxus | cds-NP_009678.3_Sparadoxus | 91.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |