Gene name: CBP4
Reference locus (S288C): YGR174C
Gene biotype: protein_coding
Description: Assembly factor CBP4; Mitochondrial protein required for assembly of cytochrome bc1 complex; interacts with the Cbp3p-Cbp6p complex and newly synthesized cytochrome b (Cobp) to promote assembly of Cobp into the cytochrome bc1 complex
Top 10 interactors (score): CBP3 (0.986); QCR7 (0.933); COR1 (0.922); QCR8 (0.904); QCR6 (0.894); BCS1 (0.882); QCR10 (0.881); COB (0.875); QCR9 (0.873); CYT1 (0.87); QCR2 (0.866); CYC1 (0.852); CBS2 (0.813); CBP6 (0.806); MZM1 (0.761); INA22 (0.76); FMP25 (0.749); CYT2 (0.735); ATP4 (0.722); ARG8 (0.711)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005301.1:813648-814160:- | gene-YGR174C_AKU4011 | rna-NM_001181303.3_AKU4011 | cds-NP_011690.3_AKU4011 | 98.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000021.1:91772-92284:- | gene-YGR174C_BG1 | rna-NM_001181303.3_BG1 | cds-NP_011690.3_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005509.1:819577-820089:- | gene-YGR174C_Bruggeman | rna-NM_001181303.3_Bruggeman | cds-NP_011690.3_Bruggeman | 98.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005525.1:815428-815940:- | gene-YGR174C_CAT1 | rna-NM_001181303.3_CAT1 | cds-NP_011690.3_CAT1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005365.1:814363-814875:- | gene-YGR174C_CBS1585 | rna-NM_001181303.3_CBS1585 | cds-NP_011690.3_CBS1585 | 98.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005349.1:818255-818767:- | gene-YGR174C_CBS436 | rna-NM_001181303.3_CBS436 | cds-NP_011690.3_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005333.1:805733-806245:- | gene-YGR174C_CBS6412 | rna-NM_001181303.3_CBS6412 | cds-NP_011690.3_CBS6412 | 98.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005317.1:811228-811740:- | gene-YGR174C_CBS6413 | rna-NM_001181303.3_CBS6413 | cds-NP_011690.3_CBS6413 | 98.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001528.1:845622-846134:- | gene-YGR174C_CENPK1137D | rna-NM_001181303.3_CENPK1137D | cds-NP_011690.3_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005477.1:800238-800750:- | gene-YGR174C_EthanolRed | rna-NM_001181303.3_EthanolRed | cds-NP_011690.3_EthanolRed | 98.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005541.1:804629-805141:- | gene-YGR174C_FaliES1 | rna-NM_001181303.3_FaliES1 | cds-NP_011690.3_FaliES1 | 98.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000226.1:11001-11513:+ | gene-YGR174C_JAY291 | rna-NM_001181303.3_JAY291 | cds-NP_011690.3_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005413.1:817067-817579:- | gene-YGR174C_MUCL30387 | rna-NM_001181303.3_MUCL30387 | cds-NP_011690.3_MUCL30387 | 98.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005445.1:816766-817278:- | gene-YGR174C_MUCL30388 | rna-NM_001181303.3_MUCL30388 | cds-NP_011690.3_MUCL30388 | 98.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005285.1:809938-810450:- | gene-YGR174C_MUCL39482 | rna-NM_001181303.3_MUCL39482 | cds-NP_011690.3_MUCL39482 | 98.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005429.1:826554-827066:- | gene-YGR174C_MUCL42920 | rna-NM_001181303.3_MUCL42920 | cds-NP_011690.3_MUCL42920 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011816.1:845893-846405:- | gene-YGR174C_NCIM3186 | rna-NM_001181303.3_NCIM3186 | cds-NP_011690.3_NCIM3186 | 98.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005269.1:805047-805559:- | gene-YGR174C_NCYC1407 | rna-NM_001181303.3_NCYC1407 | cds-NP_011690.3_NCYC1407 | 98.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994146.1:824241-824753:- | gene-YGR174C_PE2H3 | rna-NM_001181303.3_PE2H3 | cds-NP_011690.3_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999878.1:829351-829863:- | gene-YGR174C_PE2H4 | rna-NM_001181303.3_PE2H4 | cds-NP_011690.3_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001139.9:845893-846405:- | gene-YGR174C_S288C | rna-NM_001181303.3_S288C | cds-NP_011690.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000035.1:69551-70063:- | gene-YGR174C_SA1 | rna-NM_001181303.3_SA1 | cds-NP_011690.3_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005493.1:825140-825652:- | gene-YGR174C_ThermosaccDry | rna-NM_001181303.3_ThermosaccDry | cds-NP_011690.3_ThermosaccDry | 98.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005461.1:929391-929903:- | gene-YGR174C_VR1 | rna-NM_001181303.3_VR1 | cds-NP_011690.3_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000016.1:126579-127091:- | gene-YGR174C_ZTW1 | rna-NM_001181303.3_ZTW1 | cds-NP_011690.3_ZTW1 | 98.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047493.1:816367-816878:- | gene-YGR174C_Sparadoxus | rna-NM_001181303.3_Sparadoxus | cds-NP_011690.3_Sparadoxus | 89.0 | 99.8 | Unannotated | 1 | 1 | 0 | False | False | True | False | False |