Gene name: CBP1
Reference locus (S288C): YJL209W
Gene biotype: protein_coding
Description: Cytochrome B pre-mRNA-processing protein 1; Mitochondrial protein, regulator of COB mRNA stability and translation; interacts with the 5'-untranslated region of the COB mRNA; found in a complex at the inner membrane along with Pet309p; localizes to mitochondrial foci upon DNA replication stress
Top 10 interactors (score): PET309 (0.869); COB (0.861); RCN1 (0.814); CBP2 (0.78); BI2 (0.78); CBS2 (0.78); CBS1 (0.78); CBT1 (0.78); BI3 (0.78); PET127 (0.773); PUF3 (0.763); AEP2 (0.714); CNA1 (0.7); URA5 (0.692); MTF1 (0.618); CMP2 (0.617); PIP2 (0.615); MSB2 (0.58); PMC1 (0.571); OAF1 (0.57)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005304.1:26408-28372:+ | gene-YJL209W_AKU4011 | rna-NM_001181642.1_AKU4011 | cds-NP_012326.1_AKU4011 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000181.1:3677-5641:+ | gene-YJL209W_BG1 | rna-NM_001181642.1_BG1 | cds-NP_012326.1_BG1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005512.1:38209-40173:+ | gene-YJL209W_Bruggeman | rna-NM_001181642.1_Bruggeman | cds-NP_012326.1_Bruggeman | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005528.1:40956-42920:+ | gene-YJL209W_CAT1 | rna-NM_001181642.1_CAT1 | cds-NP_012326.1_CAT1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005368.1:32038-34002:+ | gene-YJL209W_CBS1585 | rna-NM_001181642.1_CBS1585 | cds-NP_012326.1_CBS1585 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005352.1:56779-58743:+ | gene-YJL209W_CBS436 | rna-NM_001181642.1_CBS436 | cds-NP_012326.1_CBS436 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005336.1:28521-30485:+ | gene-YJL209W_CBS6412 | rna-NM_001181642.1_CBS6412 | cds-NP_012326.1_CBS6412 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005320.1:29517-31481:+ | gene-YJL209W_CBS6413 | rna-NM_001181642.1_CBS6413 | cds-NP_012326.1_CBS6413 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001531.1:20470-22434:+ | gene-YJL209W_CENPK1137D | rna-NM_001181642.1_CENPK1137D | cds-NP_012326.1_CENPK1137D | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005480.1:30704-32668:+ | gene-YJL209W_EthanolRed | rna-NM_001181642.1_EthanolRed | cds-NP_012326.1_EthanolRed | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005544.1:35981-37945:+ | gene-YJL209W_FaliES1 | rna-NM_001181642.1_FaliES1 | cds-NP_012326.1_FaliES1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000301.1:27133-29097:+ | gene-YJL209W_JAY291 | rna-NM_001181642.1_JAY291 | cds-NP_012326.1_JAY291 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005416.1:39942-41906:+ | gene-YJL209W_MUCL30387 | rna-NM_001181642.1_MUCL30387 | cds-NP_012326.1_MUCL30387 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005448.1:36097-38061:+ | gene-YJL209W_MUCL30388 | rna-NM_001181642.1_MUCL30388 | cds-NP_012326.1_MUCL30388 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005288.1:30778-32742:+ | gene-YJL209W_MUCL39482 | rna-NM_001181642.1_MUCL39482 | cds-NP_012326.1_MUCL39482 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005432.1:35383-37347:+ | gene-YJL209W_MUCL42920 | rna-NM_001181642.1_MUCL42920 | cds-NP_012326.1_MUCL42920 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011819.1:37984-39948:+ | gene-YJL209W_NCIM3186 | rna-NM_001181642.1_NCIM3186 | cds-NP_012326.1_NCIM3186 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005272.1:29394-31358:+ | gene-YJL209W_NCYC1407 | rna-NM_001181642.1_NCYC1407 | cds-NP_012326.1_NCYC1407 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994149.1:42079-44043:+ | gene-YJL209W_PE2H3 | rna-NM_001181642.1_PE2H3 | cds-NP_012326.1_PE2H3 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999881.1:35967-37931:+ | gene-YJL209W_PE2H4 | rna-NM_001181642.1_PE2H4 | cds-NP_012326.1_PE2H4 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001142.9:38005-39969:+ | gene-YJL209W_S288C | rna-NM_001181642.1_S288C | cds-NP_012326.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000022.1:113921-115885:- | gene-YJL209W_SA1 | rna-NM_001181642.1_SA1 | cds-NP_012326.1_SA1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005496.1:29177-31141:+ | gene-YJL209W_ThermosaccDry | rna-NM_001181642.1_ThermosaccDry | cds-NP_012326.1_ThermosaccDry | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005464.1:36035-37999:+ | gene-YJL209W_VR1 | rna-NM_001181642.1_VR1 | cds-NP_012326.1_VR1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000021.1:16760-18724:+ | gene-YJL209W_ZTW1 | rna-NM_001181642.1_ZTW1 | cds-NP_012326.1_ZTW1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047496.1:40918-42882:+ | gene-YJL209W_Sparadoxus | rna-NM_001181642.1_Sparadoxus | cds-NP_012326.1_Sparadoxus | 88.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |