CAT8 (YMR280C)


Gene profile

Gene name: CAT8
Reference locus (S288C): YMR280C
Gene biotype: protein_coding

Description: Regulatory protein CAT8; Zinc cluster transcriptional activator; necessary for derepression of a variety of genes under non-fermentative growth conditions, active after diauxic shift, binds carbon source responsive elements; relative distribution to the nucleus increases upon DNA replication stress

Top 10 interactors (score): ADR1 (0.996); SNF1 (0.953); MIG1 (0.936); ICL1 (0.87); FBP1 (0.861); SNF4 (0.85); MLS1 (0.832); RDS2 (0.82); JEN1 (0.816); PCK1 (0.809); SIP2 (0.8); ACS1 (0.789); SIP1 (0.784); GAL83 (0.784); CSM4 (0.78); HAP4 (0.765); IDP2 (0.758); GLC7 (0.722); YLR278C (0.718); SNF3 (0.717)

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005307.1:866092-870381:- gene-YMR280C_AKU4011 rna-NM_001182787.1_AKU4011 cds-NP_014007.1_AKU4011 98.8 99.7 Verified 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000069.1:83292-87593:+ gene-YMR280C_BG1 rna-NM_001182787.1_BG1 cds-NP_014007.1_BG1 99.7 100.0 Verified 1 1 1 False True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005515.1:811301-815590:- gene-YMR280C_Bruggeman rna-NM_001182787.1_Bruggeman cds-NP_014007.1_Bruggeman 98.9 99.7 Verified 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005531.1:814587-818876:- gene-YMR280C_CAT1 rna-NM_001182787.1_CAT1 cds-NP_014007.1_CAT1 99.0 99.7 Verified 1 1 1 False True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005371.1:798342-802631:- gene-YMR280C_CBS1585 rna-NM_001182787.1_CBS1585 cds-NP_014007.1_CBS1585 98.8 99.7 Verified 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005355.1:820645-824946:- gene-YMR280C_CBS436 rna-NM_001182787.1_CBS436 cds-NP_014007.1_CBS436 99.7 100.0 Mismatch 1 1 1 False True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005339.1:909916-914205:- gene-YMR280C_CBS6412 rna-NM_001182787.1_CBS6412 cds-NP_014007.1_CBS6412 98.8 99.7 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005323.1:797463-801752:- gene-YMR280C_CBS6413 rna-NM_001182787.1_CBS6413 cds-NP_014007.1_CBS6413 98.8 99.7 Verified 1 1 1 False True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001534.1:821586-825875:- gene-YMR280C_CENPK1137D rna-NM_001182787.1_CENPK1137D cds-NP_014007.1_CENPK1137D 99.0 99.7 Verified 1 1 1 False True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005486.1:858781-863070:- gene-YMR280C_EthanolRed rna-NM_001182787.1_EthanolRed cds-NP_014007.1_EthanolRed 98.8 99.7 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005547.1:804808-809097:- gene-YMR280C_FaliES1 rna-NM_001182787.1_FaliES1 cds-NP_014007.1_FaliES1 98.9 99.7 Verified 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000262.1:42636-46937:+ gene-YMR280C_JAY291 rna-NM_001182787.1_JAY291 cds-NP_014007.1_JAY291 99.5 100.0 Verified 1 1 1 False True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005419.1:805126-809415:- gene-YMR280C_MUCL30387 rna-NM_001182787.1_MUCL30387 cds-NP_014007.1_MUCL30387 99.0 99.7 Verified 1 1 1 False True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005451.1:814523-818812:- gene-YMR280C_MUCL30388 rna-NM_001182787.1_MUCL30388 cds-NP_014007.1_MUCL30388 98.8 99.7 Verified 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005291.1:799430-803719:- gene-YMR280C_MUCL39482 rna-NM_001182787.1_MUCL39482 cds-NP_014007.1_MUCL39482 98.8 99.7 Verified 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005435.1:807497-812523:- gene-YMR280C_MUCL42920 rna-NM_001182787.1_MUCL42920 cds-NP_014007.1_MUCL42920 85.1 100.0 Unannotated 1 1 0 False False False True False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011822.1:826982-831283:- gene-YMR280C_NCIM3186 rna-NM_001182787.1_NCIM3186 cds-NP_014007.1_NCIM3186 99.0 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005275.1:799073-803362:- gene-YMR280C_NCYC1407 rna-NM_001182787.1_NCYC1407 cds-NP_014007.1_NCYC1407 98.8 99.7 Verified 1 1 1 False True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994152.1:814865-819166:- gene-YMR280C_PE2H3 rna-NM_001182787.1_PE2H3 cds-NP_014007.1_PE2H3 99.5 100.0 Verified 1 1 1 False True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999884.1:810840-815141:- gene-YMR280C_PE2H4 rna-NM_001182787.1_PE2H4 cds-NP_014007.1_PE2H4 99.6 100.0 Verified 1 1 1 False True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001145.3:827028-831329:- gene-YMR280C_S288C rna-NM_001182787.1_S288C cds-NP_014007.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000036.1:4451-8752:- gene-YMR280C_SA1 rna-NM_001182787.1_SA1 cds-NP_014007.1_SA1 99.4 100.0 Verified 1 1 1 False True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005499.1:800977-805266:- gene-YMR280C_ThermosaccDry rna-NM_001182787.1_ThermosaccDry cds-NP_014007.1_ThermosaccDry 98.9 99.7 Verified 1 1 1 False True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005467.1:814213-818514:- gene-YMR280C_VR1 rna-NM_001182787.1_VR1 cds-NP_014007.1_VR1 99.7 100.0 Verified 1 1 1 False True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000028.1:216212-220501:- gene-YMR280C_ZTW1 rna-NM_001182787.1_ZTW1 cds-NP_014007.1_ZTW1 98.9 99.7 Verified 1 1 1 False True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047499.1:819414-823715:- gene-YMR280C_Sparadoxus rna-NM_001182787.1_Sparadoxus cds-NP_014007.1_Sparadoxus 88.1 99.9 Verified 1 1 1 False True False False False

Additional files