Gene name: CAT2
Reference locus (S288C): YML042W
Gene biotype: protein_coding
Description: Carnitine O-acetyltransferase, mitochondrial; Carnitine acetyl-CoA transferase; present in both mitochondria and peroxisomes; transfers activated acetyl groups to carnitine to form acetylcarnitine which can be shuttled across membranes
Top 10 interactors (score): FOX2 (0.999); CRC1 (0.999); SPS19 (0.995); IDP2 (0.993); YAT2 (0.991); POX1 (0.989); YAT1 (0.987); PEX5 (0.982); ACS1 (0.978); MLS1 (0.967); RAD2 (0.962); MCM3 (0.962); FAA2 (0.961); TES1 (0.957); PXP1 (0.924); FAT1 (0.922); CTT1 (0.92); ICL1 (0.919); PCD1 (0.911); FMS1 (0.91)
Homologues (species, bitscore): CRAT (Homo sapiens, 283.9); Crat (Mus musculus, 288.9); crata (Danio rerio, 274.6); crat.1 (Xenopus tropicalis, 287.3); CRAT (Drosophila melanogaster, 237.7); B0395.3 (Caenorhabditis elegans, 227.6)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005307.1:248181-250193:+ | gene-YML042W_AKU4011 | rna-NM_001182400.1_AKU4011 | cds-NP_013670.1_AKU4011 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000201.1:293221-295233:- | gene-YML042W_BG1 | rna-NM_001182400.1_BG1 | cds-NP_013670.1_BG1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005515.1:188082-190094:+ | gene-YML042W_Bruggeman | rna-NM_001182400.1_Bruggeman | cds-NP_013670.1_Bruggeman | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005531.1:190632-192644:+ | gene-YML042W_CAT1 | rna-NM_001182400.1_CAT1 | cds-NP_013670.1_CAT1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005371.1:181136-183148:+ | gene-YML042W_CBS1585 | rna-NM_001182400.1_CBS1585 | cds-NP_013670.1_CBS1585 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005355.1:186647-188659:+ | gene-YML042W_CBS436 | rna-NM_001182400.1_CBS436 | cds-NP_013670.1_CBS436 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005339.1:294869-296881:+ | gene-YML042W_CBS6412 | rna-NM_001182400.1_CBS6412 | cds-NP_013670.1_CBS6412 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005323.1:180388-182400:+ | gene-YML042W_CBS6413 | rna-NM_001182400.1_CBS6413 | cds-NP_013670.1_CBS6413 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001534.1:193091-195103:+ | gene-YML042W_CENPK1137D | rna-NM_001182400.1_CENPK1137D | cds-NP_013670.1_CENPK1137D | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005483.1:181134-183146:+ | gene-YML042W_EthanolRed | rna-NM_001182400.1_EthanolRed | cds-NP_013670.1_EthanolRed | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005547.1:184098-186110:+ | gene-YML042W_FaliES1 | rna-NM_001182400.1_FaliES1 | cds-NP_013670.1_FaliES1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000237.1:26025-28037:- | gene-YML042W_JAY291 | rna-NM_001182400.1_JAY291 | cds-NP_013670.1_JAY291 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005419.1:185817-187829:+ | gene-YML042W_MUCL30387 | rna-NM_001182400.1_MUCL30387 | cds-NP_013670.1_MUCL30387 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005451.1:189828-191840:+ | gene-YML042W_MUCL30388 | rna-NM_001182400.1_MUCL30388 | cds-NP_013670.1_MUCL30388 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005291.1:181416-183428:+ | gene-YML042W_MUCL39482 | rna-NM_001182400.1_MUCL39482 | cds-NP_013670.1_MUCL39482 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005435.1:186920-188932:+ | gene-YML042W_MUCL42920 | rna-NM_001182400.1_MUCL42920 | cds-NP_013670.1_MUCL42920 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011822.1:192742-194754:+ | gene-YML042W_NCIM3186 | rna-NM_001182400.1_NCIM3186 | cds-NP_013670.1_NCIM3186 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005275.1:181359-183371:+ | gene-YML042W_NCYC1407 | rna-NM_001182400.1_NCYC1407 | cds-NP_013670.1_NCYC1407 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994152.1:187239-189251:+ | gene-YML042W_PE2H3 | rna-NM_001182400.1_PE2H3 | cds-NP_013670.1_PE2H3 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999884.1:193334-195346:+ | gene-YML042W_PE2H4 | rna-NM_001182400.1_PE2H4 | cds-NP_013670.1_PE2H4 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001145.3:192788-194800:+ | gene-YML042W_S288C | rna-NM_001182400.1_S288C | cds-NP_013670.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000088.1:38271-40283:- | gene-YML042W_SA1 | rna-NM_001182400.1_SA1 | cds-NP_013670.1_SA1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005499.1:181171-183183:+ | gene-YML042W_ThermosaccDry | rna-NM_001182400.1_ThermosaccDry | cds-NP_013670.1_ThermosaccDry | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005467.1:185180-187192:+ | gene-YML042W_VR1 | rna-NM_001182400.1_VR1 | cds-NP_013670.1_VR1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000027.1:160248-162260:+ | gene-YML042W_ZTW1 | rna-NM_001182400.1_ZTW1 | cds-NP_013670.1_ZTW1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047499.1:191767-193779:+ | gene-YML042W_Sparadoxus | rna-NM_001182400.1_Sparadoxus | cds-NP_013670.1_Sparadoxus | 90.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |