CAR1 (YPL111W)


Gene profile

Gene name: CAR1
Reference locus (S288C): YPL111W
Gene biotype: protein_coding

Description: Arginase, catabolizes arginine to ornithine and urea; expression responds to both induction by arginine and nitrogen catabolite repression; disruption decreases production of carcinogen ethyl carbamate during wine fermentation and also enhances freeze tolerance

Top 10 interactors (score): CAR2 (0.999); ARG3 (0.998); SPE1 (0.996); DUR1,2 (0.995); ARG4 (0.989); ARG5,6 (0.979); ARG7 (0.966); PUT1 (0.95); NIT3 (0.939); SPE3 (0.937); ARG1 (0.937); PRO3 (0.928); POT1 (0.908); PUT2 (0.907); DCK1 (0.901); VID28 (0.9); PEP4 (0.9); BUD16 (0.9); YFR018C (0.9); KAP95 (0.9)

Homologues (species, bitscore): ARG1 (Homo sapiens, 221.9); Arg1 (Mus musculus, 213.0); arg2 (Danio rerio, 213.8); arg1 (Xenopus tropicalis, 212.2); arg (Drosophila melanogaster, 172.9); T21F4.1 (Caenorhabditis elegans, 111.7); ARGAH2 (Arabidopsis thaliana, 52.8)

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005310.1:317583-318584:+ gene-YPL111W_AKU4011 rna-NM_001183925.1_AKU4011 cds-NP_015214.1_AKU4011 99.4 100.0 Verified 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000069.1:523339-524340:+ gene-YPL111W_BG1 rna-NM_001183925.1_BG1 cds-NP_015214.1_BG1 100.0 100.0 Verified 1 1 1 True True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005518.1:343588-344589:+ gene-YPL111W_Bruggeman rna-NM_001183925.1_Bruggeman cds-NP_015214.1_Bruggeman 99.4 100.0 Verified 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005534.1:340255-341256:+ gene-YPL111W_CAT1 rna-NM_001183925.1_CAT1 cds-NP_015214.1_CAT1 100.0 100.0 Verified 1 1 1 True True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005374.1:321656-322657:+ gene-YPL111W_CBS1585 rna-NM_001183925.1_CBS1585 cds-NP_015214.1_CBS1585 99.3 100.0 Verified 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005358.1:336331-337332:+ gene-YPL111W_CBS436 rna-NM_001183925.1_CBS436 cds-NP_015214.1_CBS436 100.0 100.0 Mismatch 1 1 1 True True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005342.1:326325-327326:+ gene-YPL111W_CBS6412 rna-NM_001183925.1_CBS6412 cds-NP_015214.1_CBS6412 99.4 100.0 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005326.1:318292-319293:+ gene-YPL111W_CBS6413 rna-NM_001183925.1_CBS6413 cds-NP_015214.1_CBS6413 99.4 100.0 Verified 1 1 1 False True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001537.1:339893-340894:+ gene-YPL111W_CENPK1137D rna-NM_001183925.1_CENPK1137D cds-NP_015214.1_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005486.1:316273-317274:+ gene-YPL111W_EthanolRed rna-NM_001183925.1_EthanolRed cds-NP_015214.1_EthanolRed 99.3 100.0 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005550.1:323865-324866:+ gene-YPL111W_FaliES1 rna-NM_001183925.1_FaliES1 cds-NP_015214.1_FaliES1 99.3 100.0 Verified 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000007.1:40951-41952:- gene-YPL111W_JAY291 rna-NM_001183925.1_JAY291 cds-NP_015214.1_JAY291 100.0 100.0 Verified 1 1 1 True True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005422.1:334828-335829:+ gene-YPL111W_MUCL30387 rna-NM_001183925.1_MUCL30387 cds-NP_015214.1_MUCL30387 99.4 100.0 Verified 1 1 1 False True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005454.1:333098-334099:+ gene-YPL111W_MUCL30388 rna-NM_001183925.1_MUCL30388 cds-NP_015214.1_MUCL30388 99.4 100.0 Verified 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005294.1:314985-315986:+ gene-YPL111W_MUCL39482 rna-NM_001183925.1_MUCL39482 cds-NP_015214.1_MUCL39482 99.3 100.0 Verified 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005438.1:372673-373674:+ gene-YPL111W_MUCL42920 rna-NM_001183925.1_MUCL42920 cds-NP_015214.1_MUCL42920 99.4 100.0 Verified 1 1 1 False True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011825.1:339927-340928:+ gene-YPL111W_NCIM3186 rna-NM_001183925.1_NCIM3186 cds-NP_015214.1_NCIM3186 99.2 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005278.1:321438-322439:+ gene-YPL111W_NCYC1407 rna-NM_001183925.1_NCYC1407 cds-NP_015214.1_NCYC1407 99.4 100.0 Verified 1 1 1 False True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994155.1:328930-329931:+ gene-YPL111W_PE2H3 rna-NM_001183925.1_PE2H3 cds-NP_015214.1_PE2H3 100.0 100.0 Verified 1 1 1 True True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999887.1:328553-329554:+ gene-YPL111W_PE2H4 rna-NM_001183925.1_PE2H4 cds-NP_015214.1_PE2H4 100.0 100.0 Verified 1 1 1 True True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001148.4:339944-340945:+ gene-YPL111W_S288C rna-NM_001183925.1_S288C cds-NP_015214.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000012.1:32737-33738:- gene-YPL111W_SA1 rna-NM_001183925.1_SA1 cds-NP_015214.1_SA1 99.9 100.0 Verified 1 1 1 True True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005502.1:323663-324664:+ gene-YPL111W_ThermosaccDry rna-NM_001183925.1_ThermosaccDry cds-NP_015214.1_ThermosaccDry 99.3 100.0 Verified 1 1 1 False True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005470.1:338642-339643:+ gene-YPL111W_VR1 rna-NM_001183925.1_VR1 cds-NP_015214.1_VR1 100.0 100.0 Verified 1 1 1 True True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000033.1:322988-323989:+ gene-YPL111W_ZTW1 rna-NM_001183925.1_ZTW1 cds-NP_015214.1_ZTW1 99.3 100.0 Verified 1 1 1 False True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047502.1:324710-325711:+ gene-YPL111W_Sparadoxus rna-NM_001183925.1_Sparadoxus cds-NP_015214.1_Sparadoxus 91.4 100.0 Verified 1 1 1 False True False False False

Additional files