Gene name: CAP2
Reference locus (S288C): YIL034C
Gene biotype: protein_coding
Description: Beta subunit of the capping protein heterodimer (Cap1p and Cap2p); capping protein (CP) binds to the barbed ends of actin filaments preventing further polymerization; localized predominantly to cortical actin patches; protein increases in abundance and relocalizes from bud neck to plasma membrane upon DNA replication stress
Top 10 interactors (score): CAP1 (0.999); ACT1 (0.997); ABP1 (0.997); SAC6 (0.994); ARP1 (0.991); AIP1 (0.958); COF1 (0.951); LAS17 (0.941); TWF1 (0.931); PFY1 (0.929); AIM21 (0.927); ARC35 (0.925); ARP2 (0.924); ARC15 (0.916); ARP9 (0.911); BBC1 (0.87); ARP3 (0.861); ARC18 (0.837); ARC40 (0.829); CRN1 (0.825)
Homologues (species, bitscore): CAPZB (Homo sapiens, 241.1); Capzb (Mus musculus, 241.1); capzb (Danio rerio, 242.7); capzb (Xenopus tropicalis, 162.2); cpb (Drosophila melanogaster, 237.3); cap-2 (Caenorhabditis elegans, 219.9); CPB (Arabidopsis thaliana, 189.5)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005303.1:286055-286918:- | gene-YIL034C_AKU4011 | rna-NM_001179384.3_AKU4011 | cds-NP_012230.3_AKU4011 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000164.1:147507-148370:- | gene-YIL034C_BG1 | rna-NM_001179384.3_BG1 | cds-NP_012230.3_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005511.1:292326-293189:- | gene-YIL034C_Bruggeman | rna-NM_001179384.3_Bruggeman | cds-NP_012230.3_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005527.1:280242-281105:- | gene-YIL034C_CAT1 | rna-NM_001179384.3_CAT1 | cds-NP_012230.3_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005367.1:285883-286746:- | gene-YIL034C_CBS1585 | rna-NM_001179384.3_CBS1585 | cds-NP_012230.3_CBS1585 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005351.1:281204-282067:- | gene-YIL034C_CBS436 | rna-NM_001179384.3_CBS436 | cds-NP_012230.3_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005335.1:282498-283361:- | gene-YIL034C_CBS6412 | rna-NM_001179384.3_CBS6412 | cds-NP_012230.3_CBS6412 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005319.1:278046-278909:- | gene-YIL034C_CBS6413 | rna-NM_001179384.3_CBS6413 | cds-NP_012230.3_CBS6413 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001530.1:281138-282001:- | gene-YIL034C_CENPK1137D | rna-NM_001179384.3_CENPK1137D | cds-NP_012230.3_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005479.1:269969-270832:- | gene-YIL034C_EthanolRed | rna-NM_001179384.3_EthanolRed | cds-NP_012230.3_EthanolRed | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005543.1:287508-288371:- | gene-YIL034C_FaliES1 | rna-NM_001179384.3_FaliES1 | cds-NP_012230.3_FaliES1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000365.1:10496-11359:+ | gene-YIL034C_JAY291 | rna-NM_001179384.3_JAY291 | cds-NP_012230.3_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005415.1:289176-290039:- | gene-YIL034C_MUCL30387 | rna-NM_001179384.3_MUCL30387 | cds-NP_012230.3_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005447.1:285779-286642:- | gene-YIL034C_MUCL30388 | rna-NM_001179384.3_MUCL30388 | cds-NP_012230.3_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005287.1:286723-287586:- | gene-YIL034C_MUCL39482 | rna-NM_001179384.3_MUCL39482 | cds-NP_012230.3_MUCL39482 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005431.1:289866-290729:- | gene-YIL034C_MUCL42920 | rna-NM_001179384.3_MUCL42920 | cds-NP_012230.3_MUCL42920 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011818.1:289226-290089:- | gene-YIL034C_NCIM3186 | rna-NM_001179384.3_NCIM3186 | cds-NP_012230.3_NCIM3186 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005271.1:290996-291859:- | gene-YIL034C_NCYC1407 | rna-NM_001179384.3_NCYC1407 | cds-NP_012230.3_NCYC1407 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994148.1:284258-285121:- | gene-YIL034C_PE2H3 | rna-NM_001179384.3_PE2H3 | cds-NP_012230.3_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999880.1:278964-279827:- | gene-YIL034C_PE2H4 | rna-NM_001179384.3_PE2H4 | cds-NP_012230.3_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001141.2:289226-290089:- | gene-YIL034C_S288C | rna-NM_001179384.3_S288C | cds-NP_012230.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000031.1:36067-36930:+ | gene-YIL034C_SA1 | rna-NM_001179384.3_SA1 | cds-NP_012230.3_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005495.1:286177-287040:- | gene-YIL034C_ThermosaccDry | rna-NM_001179384.3_ThermosaccDry | cds-NP_012230.3_ThermosaccDry | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005463.1:283615-284478:- | gene-YIL034C_VR1 | rna-NM_001179384.3_VR1 | cds-NP_012230.3_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000019.1:260030-260893:- | gene-YIL034C_ZTW1 | rna-NM_001179384.3_ZTW1 | cds-NP_012230.3_ZTW1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047495.1:282098-282961:- | gene-YIL034C_Sparadoxus | rna-NM_001179384.3_Sparadoxus | cds-NP_012230.3_Sparadoxus | 92.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |