Gene name: CAP1
Reference locus (S288C): YKL007W
Gene biotype: protein_coding
Description: Alpha subunit of the capping protein heterodimer (Cap1p and Cap2p); capping protein (CP) binds to the barbed ends of actin filaments preventing further polymerization; localized predominantly to cortical actin patches; protein increases in abundance and relocalizes from bud neck to plasma membrane upon DNA replication stress
Top 10 interactors (score): CAP2 (0.999); SHE4 (0.989); ARC35 (0.974); ARP1 (0.926); ARP2 (0.919); BYE1 (0.912); ACT1 (0.864); ARC18 (0.852); AIP1 (0.85); COF1 (0.826); AIM21 (0.805); ARP9 (0.803); SAC6 (0.787); MTD1 (0.786); TDA2 (0.775); RPL14A (0.771); LAC1 (0.748); DYN1 (0.716); DST1 (0.708); PFY1 (0.697)
Homologues (species, bitscore): CAPZA2 (Homo sapiens, 131.7); Capza2 (Mus musculus, 134.8); capza1b (Danio rerio, 132.1); capza1 (Xenopus tropicalis, 133.7); cpa (Drosophila melanogaster, 125.6); cap-1 (Caenorhabditis elegans, 129.0); CPA (Arabidopsis thaliana, 96.3)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005305.1:415318-416124:+ | gene-YKL007W_AKU4011 | rna-NM_001179573.1_AKU4011 | cds-NP_012918.1_AKU4011 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000113.1:227779-228585:- | gene-YKL007W_BG1 | rna-NM_001179573.1_BG1 | cds-NP_012918.1_BG1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005513.1:437024-437830:+ | gene-YKL007W_Bruggeman | rna-NM_001179573.1_Bruggeman | cds-NP_012918.1_Bruggeman | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005529.1:432130-432936:+ | gene-YKL007W_CAT1 | rna-NM_001179573.1_CAT1 | cds-NP_012918.1_CAT1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005369.1:428037-428843:+ | gene-YKL007W_CBS1585 | rna-NM_001179573.1_CBS1585 | cds-NP_012918.1_CBS1585 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005353.1:426900-427706:+ | gene-YKL007W_CBS436 | rna-NM_001179573.1_CBS436 | cds-NP_012918.1_CBS436 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005337.1:412194-413000:+ | gene-YKL007W_CBS6412 | rna-NM_001179573.1_CBS6412 | cds-NP_012918.1_CBS6412 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005321.1:427892-428698:+ | gene-YKL007W_CBS6413 | rna-NM_001179573.1_CBS6413 | cds-NP_012918.1_CBS6413 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001532.1:428979-429785:+ | gene-YKL007W_CENPK1137D | rna-NM_001179573.1_CENPK1137D | cds-NP_012918.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005481.1:425798-426604:+ | gene-YKL007W_EthanolRed | rna-NM_001179573.1_EthanolRed | cds-NP_012918.1_EthanolRed | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005545.1:427888-428694:+ | gene-YKL007W_FaliES1 | rna-NM_001179573.1_FaliES1 | cds-NP_012918.1_FaliES1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000142.1:2341-3147:- | gene-YKL007W_JAY291 | rna-NM_001179573.1_JAY291 | cds-NP_012918.1_JAY291 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005417.1:436341-437147:+ | gene-YKL007W_MUCL30387 | rna-NM_001179573.1_MUCL30387 | cds-NP_012918.1_MUCL30387 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005449.1:431948-432754:+ | gene-YKL007W_MUCL30388 | rna-NM_001179573.1_MUCL30388 | cds-NP_012918.1_MUCL30388 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005289.1:427354-428160:+ | gene-YKL007W_MUCL39482 | rna-NM_001179573.1_MUCL39482 | cds-NP_012918.1_MUCL39482 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005433.1:433185-433991:+ | gene-YKL007W_MUCL42920 | rna-NM_001179573.1_MUCL42920 | cds-NP_012918.1_MUCL42920 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011820.1:429291-430097:+ | gene-YKL007W_NCIM3186 | rna-NM_001179573.1_NCIM3186 | cds-NP_012918.1_NCIM3186 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005273.1:427547-428353:+ | gene-YKL007W_NCYC1407 | rna-NM_001179573.1_NCYC1407 | cds-NP_012918.1_NCYC1407 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994150.1:452238-453044:+ | gene-YKL007W_PE2H3 | rna-NM_001179573.1_PE2H3 | cds-NP_012918.1_PE2H3 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999882.1:436979-437785:+ | gene-YKL007W_PE2H4 | rna-NM_001179573.1_PE2H4 | cds-NP_012918.1_PE2H4 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001143.9:429302-430108:+ | gene-YKL007W_S288C | rna-NM_001179573.1_S288C | cds-NP_012918.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000027.1:107582-108388:+ | gene-YKL007W_SA1 | rna-NM_001179573.1_SA1 | cds-NP_012918.1_SA1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005497.1:427987-428793:+ | gene-YKL007W_ThermosaccDry | rna-NM_001179573.1_ThermosaccDry | cds-NP_012918.1_ThermosaccDry | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005465.1:427260-428066:+ | gene-YKL007W_VR1 | rna-NM_001179573.1_VR1 | cds-NP_012918.1_VR1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000022.1:426033-426839:+ | gene-YKL007W_ZTW1 | rna-NM_001179573.1_ZTW1 | cds-NP_012918.1_ZTW1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047497.1:451009-451815:+ | gene-YKL007W_Sparadoxus | rna-NM_001179573.1_Sparadoxus | cds-NP_012918.1_Sparadoxus | 89.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |