Gene name: CAB1
Reference locus (S288C): YDR531W
Gene biotype: protein_coding
Description: Pantothenate kinase, ATP:D-pantothenate 4'-phosphotransferase; catalyzes the first committed step in the universal biosynthetic pathway for synthesis of coenzyme A (CoA); transcriptionally regulated by Upc2p via a sterol response element
Top 10 interactors (score): CAB2 (0.998); CAB4 (0.997); CAB3 (0.995); PAN6 (0.994); CAB5 (0.957); PAN5 (0.898); ECM31 (0.864); VHS3 (0.788); YHL026C (0.76); FEN2 (0.757); SIS2 (0.728); TDA10 (0.694); SCS7 (0.689); BAT2 (0.677); YHC1 (0.651); HEM12 (0.645); YDR248C (0.619); SUR2 (0.607); YPK9 (0.596); CDC21 (0.584)
Homologues (species, bitscore): PANK4 (Homo sapiens, 228.4); Pank4 (Mus musculus, 227.3); pank4 (Danio rerio, 233.8); pank4 (Xenopus tropicalis, 231.9); fbl (Drosophila melanogaster, 186.0); pnk-1 (Caenorhabditis elegans, 238.4); PANK1 (Arabidopsis thaliana, 257.3)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005298.1:1438245-1439348:+ | gene-YDR531W_AKU4011 | rna-NM_001180839.3_AKU4011 | cds-NP_010820.3_AKU4011 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000073.1:79889-80992:+ | gene-YDR531W_BG1 | rna-NM_001180839.3_BG1 | cds-NP_010820.3_BG1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005506.1:1469537-1470640:+ | gene-YDR531W_Bruggeman | rna-NM_001180839.3_Bruggeman | cds-NP_010820.3_Bruggeman | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005522.1:1446729-1447832:+ | gene-YDR531W_CAT1 | rna-NM_001180839.3_CAT1 | cds-NP_010820.3_CAT1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005362.1:1432973-1434076:+ | gene-YDR531W_CBS1585 | rna-NM_001180839.3_CBS1585 | cds-NP_010820.3_CBS1585 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005346.1:1452198-1453301:+ | gene-YDR531W_CBS436 | rna-NM_001180839.3_CBS436 | cds-NP_010820.3_CBS436 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005330.1:1428137-1429240:+ | gene-YDR531W_CBS6412 | rna-NM_001180839.3_CBS6412 | cds-NP_010820.3_CBS6412 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005314.1:1451633-1452736:+ | gene-YDR531W_CBS6413 | rna-NM_001180839.3_CBS6413 | cds-NP_010820.3_CBS6413 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001525.1:1496907-1498010:+ | gene-YDR531W_CENPK1137D | rna-NM_001180839.3_CENPK1137D | cds-NP_010820.3_CENPK1137D | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005474.1:1441504-1442607:+ | gene-YDR531W_EthanolRed | rna-NM_001180839.3_EthanolRed | cds-NP_010820.3_EthanolRed | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005538.1:1445056-1446159:+ | gene-YDR531W_FaliES1 | rna-NM_001180839.3_FaliES1 | cds-NP_010820.3_FaliES1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000026.1:143420-144523:+ | gene-YDR531W_JAY291 | rna-NM_001180839.3_JAY291 | cds-NP_010820.3_JAY291 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005410.1:1452650-1453753:+ | gene-YDR531W_MUCL30387 | rna-NM_001180839.3_MUCL30387 | cds-NP_010820.3_MUCL30387 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005442.1:1434074-1435177:+ | gene-YDR531W_MUCL30388 | rna-NM_001180839.3_MUCL30388 | cds-NP_010820.3_MUCL30388 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005282.1:1424470-1425573:+ | gene-YDR531W_MUCL39482 | rna-NM_001180839.3_MUCL39482 | cds-NP_010820.3_MUCL39482 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005426.1:1367123-1368226:+ | gene-YDR531W_MUCL42920 | rna-NM_001180839.3_MUCL42920 | cds-NP_010820.3_MUCL42920 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011813.1:1498155-1499258:+ | gene-YDR531W_NCIM3186 | rna-NM_001180839.3_NCIM3186 | cds-NP_010820.3_NCIM3186 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005266.1:1437763-1438866:+ | gene-YDR531W_NCYC1407 | rna-NM_001180839.3_NCYC1407 | cds-NP_010820.3_NCYC1407 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994143.1:1448688-1449791:+ | gene-YDR531W_PE2H3 | rna-NM_001180839.3_PE2H3 | cds-NP_010820.3_PE2H3 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999875.1:1454156-1455259:+ | gene-YDR531W_PE2H4 | rna-NM_001180839.3_PE2H4 | cds-NP_010820.3_PE2H4 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001136.10:1498232-1499335:+ | gene-YDR531W_S288C | rna-NM_001180839.3_S288C | cds-NP_010820.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000004.1:117778-118881:- | gene-YDR531W_SA1 | rna-NM_001180839.3_SA1 | cds-NP_010820.3_SA1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005490.1:1449278-1450381:+ | gene-YDR531W_ThermosaccDry | rna-NM_001180839.3_ThermosaccDry | cds-NP_010820.3_ThermosaccDry | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005458.1:1465078-1466181:+ | gene-YDR531W_VR1 | rna-NM_001180839.3_VR1 | cds-NP_010820.3_VR1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000008.1:491932-493035:+ | gene-YDR531W_ZTW1 | rna-NM_001180839.3_ZTW1 | cds-NP_010820.3_ZTW1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047490.1:1458225-1459328:+ | gene-YDR531W_Sparadoxus | rna-NM_001180839.3_Sparadoxus | cds-NP_010820.3_Sparadoxus | 92.8 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | False | True |