Gene name: BUD31
Reference locus (S288C): YCR063W
Gene biotype: protein_coding
Description: Pre-mRNA-splicing factor BUD31; Component of the SF3b subcomplex of the U2 snRNP; increases efficiency of first and second step pre-mRNA splicing; diploid mutants display a random budding pattern instead of the wild-type bipolar pattern; facilitates passage through G1/S Start, but is not required for G2/M transition or exit from mitosis
Top 10 interactors (score): CUS1 (0.999); CDC40 (0.999); HSH155 (0.999); CEF1 (0.999); CWC25 (0.999); SMD2 (0.999); BRR2 (0.999); LEA1 (0.999); PRP19 (0.999); PRP22 (0.999); ECM2 (0.999); PRP45 (0.999); PRP11 (0.999); ISY1 (0.999); SYF1 (0.999); CWC21 (0.999); SNU114 (0.999); CWC2 (0.999); SYF2 (0.999); CWC15 (0.999)
Homologues (species, bitscore): BUD31 (Homo sapiens, 162.9); Bud31 (Mus musculus, 102.8); bud31 (Danio rerio, 167.2); bud31 (Xenopus tropicalis, 165.2); l(1)10Bb (Drosophila melanogaster, 168.7); C07A9.2 (Caenorhabditis elegans, 143.7); AT4G21110 (Arabidopsis thaliana, 160.6)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005297.1:222790-223263:+ | gene-YCR063W_AKU4011 | rna-NM_001178774.1_AKU4011 | cds-NP_009990.1_AKU4011 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000067.1:77274-77747:+ | gene-YCR063W_BG1 | rna-NM_001178774.1_BG1 | cds-NP_009990.1_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005505.1:218750-219223:+ | gene-YCR063W_Bruggeman | rna-NM_001178774.1_Bruggeman | cds-NP_009990.1_Bruggeman | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005521.1:230113-230586:+ | gene-YCR063W_CAT1 | rna-NM_001178774.1_CAT1 | cds-NP_009990.1_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005361.1:217568-218041:+ | gene-YCR063W_CBS1585 | rna-NM_001178774.1_CBS1585 | cds-NP_009990.1_CBS1585 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005345.1:229451-229924:+ | gene-YCR063W_CBS436 | rna-NM_001178774.1_CBS436 | cds-NP_009990.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005329.1:209308-209781:+ | gene-YCR063W_CBS6412 | rna-NM_001178774.1_CBS6412 | cds-NP_009990.1_CBS6412 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005313.1:223685-224158:+ | gene-YCR063W_CBS6413 | rna-NM_001178774.1_CBS6413 | cds-NP_009990.1_CBS6413 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001524.1:227517-227990:+ | gene-YCR063W_CENPK1137D | rna-NM_001178774.1_CENPK1137D | cds-NP_009990.1_CENPK1137D | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005473.1:218753-219226:+ | gene-YCR063W_EthanolRed | rna-NM_001178774.1_EthanolRed | cds-NP_009990.1_EthanolRed | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005537.1:223918-224391:+ | gene-YCR063W_FaliES1 | rna-NM_001178774.1_FaliES1 | cds-NP_009990.1_FaliES1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000323.1:64279-64752:- | gene-YCR063W_JAY291 | rna-NM_001178774.1_JAY291 | cds-NP_009990.1_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005409.1:215722-216195:+ | gene-YCR063W_MUCL30387 | rna-NM_001178774.1_MUCL30387 | cds-NP_009990.1_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005441.1:216041-216514:+ | gene-YCR063W_MUCL30388 | rna-NM_001178774.1_MUCL30388 | cds-NP_009990.1_MUCL30388 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005281.1:224141-224614:+ | gene-YCR063W_MUCL39482 | rna-NM_001178774.1_MUCL39482 | cds-NP_009990.1_MUCL39482 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005425.1:220582-221055:+ | gene-YCR063W_MUCL42920 | rna-NM_001178774.1_MUCL42920 | cds-NP_009990.1_MUCL42920 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011812.1:227950-228423:+ | gene-YCR063W_NCIM3186 | rna-NM_001178774.1_NCIM3186 | cds-NP_009990.1_NCIM3186 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005265.1:225000-225473:+ | gene-YCR063W_NCYC1407 | rna-NM_001178774.1_NCYC1407 | cds-NP_009990.1_NCYC1407 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994142.1:239633-240106:+ | gene-YCR063W_PE2H3 | rna-NM_001178774.1_PE2H3 | cds-NP_009990.1_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999874.1:228184-228657:+ | gene-YCR063W_PE2H4 | rna-NM_001178774.1_PE2H4 | cds-NP_009990.1_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001135.5:228318-228791:+ | gene-YCR063W_S288C | rna-NM_001178774.1_S288C | cds-NP_009990.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000044.1:28208-28681:+ | gene-YCR063W_SA1 | rna-NM_001178774.1_SA1 | cds-NP_009990.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005489.1:223903-224376:+ | gene-YCR063W_ThermosaccDry | rna-NM_001178774.1_ThermosaccDry | cds-NP_009990.1_ThermosaccDry | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005457.1:235169-235642:+ | gene-YCR063W_VR1 | rna-NM_001178774.1_VR1 | cds-NP_009990.1_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000004.1:221720-222193:+ | gene-YCR063W_ZTW1 | rna-NM_001178774.1_ZTW1 | cds-NP_009990.1_ZTW1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047489.1:255912-256385:+ | gene-YCR063W_Sparadoxus | rna-NM_001178774.1_Sparadoxus | cds-NP_009990.1_Sparadoxus | 94.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |