Gene name: BUD3
Reference locus (S288C): YCL014W
Gene biotype: protein_coding
Description: Bud site selection protein 3; Guanine nucleotide exchange factor (GEF) for Cdc42p; activates Cdc42p in early G1, accounting for the first stage of biphasic activation, with Cdc24p accounting for the second stage in late G1; involved in the Cdc42p-mediated assembly of the axial landmark that dictates the site for the next round of budding, resulting in the axial budding pattern observed in haploids; localizes with septins to the bud neck contractile ring in mitosis
Top 10 interactors (score): BUD4 (0.995); AXL2 (0.935); BUD5 (0.922); RHO4 (0.909); AXL1 (0.895); CDC12 (0.88); CLB2 (0.879); RSR1 (0.87); BUD2 (0.845); CDC42 (0.817); BUD9 (0.813); CDC28 (0.797); SHS1 (0.792); BUD8 (0.777); GIN4 (0.759); CLA4 (0.757); MRPL16 (0.752); RAX1 (0.746); RAX2 (0.746); CDC3 (0.718)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005297.1:90989-95899:+ | gene-YCL014W_AKU4011 | rna-NM_001178662.1_AKU4011 | cds-NP_009914.2_AKU4011 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000178.1:50141-55051:- | gene-YCL014W_BG1 | rna-NM_001178662.1_BG1 | cds-NP_009914.2_BG1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005505.1:85578-90488:+ | gene-YCL014W_Bruggeman | rna-NM_001178662.1_Bruggeman | cds-NP_009914.2_Bruggeman | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005521.1:90793-95632:+ | gene-YCL014W_CAT1 | rna-NM_001178662.1_CAT1 | cds-NP_009914.2_CAT1 | 97.3 | 98.5 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005361.1:91638-96548:+ | gene-YCL014W_CBS1585 | rna-NM_001178662.1_CBS1585 | cds-NP_009914.2_CBS1585 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005345.1:96557-101467:+ | gene-YCL014W_CBS436 | rna-NM_001178662.1_CBS436 | cds-NP_009914.2_CBS436 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005329.1:79096-84006:+ | gene-YCL014W_CBS6412 | rna-NM_001178662.1_CBS6412 | cds-NP_009914.2_CBS6412 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005313.1:90945-95855:+ | gene-YCL014W_CBS6413 | rna-NM_001178662.1_CBS6413 | cds-NP_009914.2_CBS6413 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001524.1:95758-100668:+ | gene-YCL014W_CENPK1137D | rna-NM_001178662.1_CENPK1137D | cds-NP_009914.2_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005473.1:89007-93917:+ | gene-YCL014W_EthanolRed | rna-NM_001178662.1_EthanolRed | cds-NP_009914.2_EthanolRed | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005537.1:91297-96207:+ | gene-YCL014W_FaliES1 | rna-NM_001178662.1_FaliES1 | cds-NP_009914.2_FaliES1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000126.1:5472-10382:+ | gene-YCL014W_JAY291 | rna-NM_001178662.1_JAY291 | cds-NP_009914.2_JAY291 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005409.1:84014-88924:+ | gene-YCL014W_MUCL30387 | rna-NM_001178662.1_MUCL30387 | cds-NP_009914.2_MUCL30387 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005441.1:83568-88478:+ | gene-YCL014W_MUCL30388 | rna-NM_001178662.1_MUCL30388 | cds-NP_009914.2_MUCL30388 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005281.1:92054-96964:+ | gene-YCL014W_MUCL39482 | rna-NM_001178662.1_MUCL39482 | cds-NP_009914.2_MUCL39482 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005425.1:87290-92200:+ | gene-YCL014W_MUCL42920 | rna-NM_001178662.1_MUCL42920 | cds-NP_009914.2_MUCL42920 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011812.1:95913-100823:+ | gene-YCL014W_NCIM3186 | rna-NM_001178662.1_NCIM3186 | cds-NP_009914.2_NCIM3186 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005265.1:92537-97447:+ | gene-YCL014W_NCYC1407 | rna-NM_001178662.1_NCYC1407 | cds-NP_009914.2_NCYC1407 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994142.1:96709-101619:+ | gene-YCL014W_PE2H3 | rna-NM_001178662.1_PE2H3 | cds-NP_009914.2_PE2H3 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999874.1:96666-101576:+ | gene-YCL014W_PE2H4 | rna-NM_001178662.1_PE2H4 | cds-NP_009914.2_PE2H4 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001135.5:96281-101191:+ | gene-YCL014W_S288C | rna-NM_001178662.1_S288C | cds-NP_009914.2_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000073.1:50150-55060:- | gene-YCL014W_SA1 | rna-NM_001178662.1_SA1 | cds-NP_009914.2_SA1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005489.1:91871-96781:+ | gene-YCL014W_ThermosaccDry | rna-NM_001178662.1_ThermosaccDry | cds-NP_009914.2_ThermosaccDry | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005457.1:102513-107423:+ | gene-YCL014W_VR1 | rna-NM_001178662.1_VR1 | cds-NP_009914.2_VR1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000004.1:90813-95723:+ | gene-YCL014W_ZTW1 | rna-NM_001178662.1_ZTW1 | cds-NP_009914.2_ZTW1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047489.1:121111-125979:+ | gene-YCL014W_Sparadoxus | rna-NM_001178662.1_Sparadoxus | cds-NP_009914.2_Sparadoxus | 85.4 | 98.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |