Gene name: BUD16
Reference locus (S288C): YEL029C
Gene biotype: protein_coding
Description: Putative pyridoxal kinase; a key enzyme involved in pyridoxal 5'-phosphate synthesis, the active form of vitamin B6; required for genome integrity; involved in bud-site selection; similarity to yeast BUD17 and human pyridoxal kinase (PDXK)
Top 10 interactors (score): PDX3 (0.969); CUE5 (0.902); YPR127W (0.902); NIT3 (0.901); THI12 (0.9); YLR456W (0.9); PEP4 (0.9); CAR1 (0.9); THI13 (0.9); VID28 (0.9); YGR017W (0.9); KAP95 (0.9); SNO1 (0.9); YPR172W (0.9); POT1 (0.9); YFR018C (0.9); THI11 (0.9); THI5 (0.9); DCK1 (0.9); SNZ1 (0.897)
Homologues (species, bitscore): PDXK (Homo sapiens, 186.4); Pdxk (Mus musculus, 180.3); pdxkb (Danio rerio, 168.3); pdxk (Xenopus tropicalis, 100.1); Pdxk (Drosophila melanogaster, 185.3); F57C9.1 (Caenorhabditis elegans, 164.1); SOS4 (Arabidopsis thaliana, 153.7)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005299.1:90915-91853:- | gene-YEL029C_AKU4011 | rna-NM_001178844.1_AKU4011 | cds-NP_010885.1_AKU4011 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000011.1:334198-335136:+ | gene-YEL029C_BG1 | rna-NM_001178844.1_BG1 | cds-NP_010885.1_BG1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005507.1:95291-96229:- | gene-YEL029C_Bruggeman | rna-NM_001178844.1_Bruggeman | cds-NP_010885.1_Bruggeman | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005523.1:92820-93758:- | gene-YEL029C_CAT1 | rna-NM_001178844.1_CAT1 | cds-NP_010885.1_CAT1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005363.1:90857-91795:- | gene-YEL029C_CBS1585 | rna-NM_001178844.1_CBS1585 | cds-NP_010885.1_CBS1585 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005347.1:92466-93404:- | gene-YEL029C_CBS436 | rna-NM_001178844.1_CBS436 | cds-NP_010885.1_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005331.1:91109-92047:- | gene-YEL029C_CBS6412 | rna-NM_001178844.1_CBS6412 | cds-NP_010885.1_CBS6412 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005315.1:95749-96687:- | gene-YEL029C_CBS6413 | rna-NM_001178844.1_CBS6413 | cds-NP_010885.1_CBS6413 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001526.1:94717-95655:- | gene-YEL029C_CENPK1137D | rna-NM_001178844.1_CENPK1137D | cds-NP_010885.1_CENPK1137D | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005475.1:90664-91602:- | gene-YEL029C_EthanolRed | rna-NM_001178844.1_EthanolRed | cds-NP_010885.1_EthanolRed | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005539.1:90930-91868:- | gene-YEL029C_FaliES1 | rna-NM_001178844.1_FaliES1 | cds-NP_010885.1_FaliES1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000398.1:10370-11308:- | gene-YEL029C_JAY291 | rna-NM_001178844.1_JAY291 | cds-NP_010885.1_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005411.1:95146-96084:- | gene-YEL029C_MUCL30387 | rna-NM_001178844.1_MUCL30387 | cds-NP_010885.1_MUCL30387 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005443.1:90898-91836:- | gene-YEL029C_MUCL30388 | rna-NM_001178844.1_MUCL30388 | cds-NP_010885.1_MUCL30388 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005283.1:90226-91164:- | gene-YEL029C_MUCL39482 | rna-NM_001178844.1_MUCL39482 | cds-NP_010885.1_MUCL39482 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005427.1:94858-95796:- | gene-YEL029C_MUCL42920 | rna-NM_001178844.1_MUCL42920 | cds-NP_010885.1_MUCL42920 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011814.1:96857-97795:- | gene-YEL029C_NCIM3186 | rna-NM_001178844.1_NCIM3186 | cds-NP_010885.1_NCIM3186 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005267.1:95320-96258:- | gene-YEL029C_NCYC1407 | rna-NM_001178844.1_NCYC1407 | cds-NP_010885.1_NCYC1407 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994144.1:99335-100273:- | gene-YEL029C_PE2H3 | rna-NM_001178844.1_PE2H3 | cds-NP_010885.1_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999876.1:95250-96188:- | gene-YEL029C_PE2H4 | rna-NM_001178844.1_PE2H4 | cds-NP_010885.1_PE2H4 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001137.3:96858-97796:- | gene-YEL029C_S288C | rna-NM_001178844.1_S288C | cds-NP_010885.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000020.1:145491-146429:+ | gene-YEL029C_SA1 | rna-NM_001178844.1_SA1 | cds-NP_010885.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005491.1:91328-92266:- | gene-YEL029C_ThermosaccDry | rna-NM_001178844.1_ThermosaccDry | cds-NP_010885.1_ThermosaccDry | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005459.1:90529-91467:- | gene-YEL029C_VR1 | rna-NM_001178844.1_VR1 | cds-NP_010885.1_VR1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000009.1:90267-91205:- | gene-YEL029C_ZTW1 | rna-NM_001178844.1_ZTW1 | cds-NP_010885.1_ZTW1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047491.1:92929-93867:- | gene-YEL029C_Sparadoxus | rna-NM_001178844.1_Sparadoxus | cds-NP_010885.1_Sparadoxus | 92.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |