Gene name: BTS1
Reference locus (S288C): YPL069C
Gene biotype: protein_coding
Description: Geranylgeranyl diphosphate synthase, type iii; Geranylgeranyl diphosphate synthase (GGPS); increases the intracellular pool of geranylgeranyl diphosphate, suppressor of bet2 mutation that causes defective geranylgeranylation of small GTP-binding proteins that mediate vesicular traffic
Top 10 interactors (score): ERG20 (0.999); ERG9 (0.997); IDI1 (0.994); MVD1 (0.992); RER2 (0.976); ERG13 (0.971); COQ1 (0.971); RAM1 (0.966); SRT1 (0.951); HMG1 (0.947); NUS1 (0.944); ERG12 (0.933); ERG1 (0.929); RAM2 (0.929); ERG10 (0.896); ERG8 (0.819); HMG2 (0.817); ERG7 (0.815); ERG11 (0.784); ALG5 (0.767)
Homologues (species, bitscore): GGPS1 (Homo sapiens, 223.0); Ggps1 (Mus musculus, 225.3); ggps1 (Danio rerio, 215.3); ggps1 (Xenopus tropicalis, 225.7); qm (Drosophila melanogaster, 212.2); coq-1 (Caenorhabditis elegans, 56.2); AT3G14530 (Arabidopsis thaliana, 60.8)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005310.1:400606-401613:- | gene-YPL069C_AKU4011 | rna-NM_001183883.1_AKU4011 | cds-NP_015256.1_AKU4011 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000069.1:606287-607294:- | gene-YPL069C_BG1 | rna-NM_001183883.1_BG1 | cds-NP_015256.1_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005518.1:476934-477941:- | gene-YPL069C_Bruggeman | rna-NM_001183883.1_Bruggeman | cds-NP_015256.1_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005534.1:517294-518301:- | gene-YPL069C_CAT1 | rna-NM_001183883.1_CAT1 | cds-NP_015256.1_CAT1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005374.1:404679-405686:- | gene-YPL069C_CBS1585 | rna-NM_001183883.1_CBS1585 | cds-NP_015256.1_CBS1585 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005358.1:419238-420245:- | gene-YPL069C_CBS436 | rna-NM_001183883.1_CBS436 | cds-NP_015256.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005342.1:408868-409875:- | gene-YPL069C_CBS6412 | rna-NM_001183883.1_CBS6412 | cds-NP_015256.1_CBS6412 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005326.1:401231-402238:- | gene-YPL069C_CBS6413 | rna-NM_001183883.1_CBS6413 | cds-NP_015256.1_CBS6413 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001537.1:422854-423861:- | gene-YPL069C_CENPK1137D | rna-NM_001183883.1_CENPK1137D | cds-NP_015256.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005486.1:398972-399979:- | gene-YPL069C_EthanolRed | rna-NM_001183883.1_EthanolRed | cds-NP_015256.1_EthanolRed | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005550.1:406802-407809:- | gene-YPL069C_FaliES1 | rna-NM_001183883.1_FaliES1 | cds-NP_015256.1_FaliES1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000283.1:15406-16413:- | gene-YPL069C_JAY291 | rna-NM_001183883.1_JAY291 | cds-NP_015256.1_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005422.1:417764-418771:- | gene-YPL069C_MUCL30387 | rna-NM_001183883.1_MUCL30387 | cds-NP_015256.1_MUCL30387 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005454.1:416851-417858:- | gene-YPL069C_MUCL30388 | rna-NM_001183883.1_MUCL30388 | cds-NP_015256.1_MUCL30388 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005294.1:398008-399015:- | gene-YPL069C_MUCL39482 | rna-NM_001183883.1_MUCL39482 | cds-NP_015256.1_MUCL39482 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005438.1:455872-456879:- | gene-YPL069C_MUCL42920 | rna-NM_001183883.1_MUCL42920 | cds-NP_015256.1_MUCL42920 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011825.1:422868-423875:- | gene-YPL069C_NCIM3186 | rna-NM_001183883.1_NCIM3186 | cds-NP_015256.1_NCIM3186 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005278.1:405292-406299:- | gene-YPL069C_NCYC1407 | rna-NM_001183883.1_NCYC1407 | cds-NP_015256.1_NCYC1407 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994155.1:411898-412905:- | gene-YPL069C_PE2H3 | rna-NM_001183883.1_PE2H3 | cds-NP_015256.1_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999887.1:411521-412528:- | gene-YPL069C_PE2H4 | rna-NM_001183883.1_PE2H4 | cds-NP_015256.1_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001148.4:422885-423892:- | gene-YPL069C_S288C | rna-NM_001183883.1_S288C | cds-NP_015256.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000057.1:44996-46003:- | gene-YPL069C_SA1 | rna-NM_001183883.1_SA1 | cds-NP_015256.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005502.1:406602-407609:- | gene-YPL069C_ThermosaccDry | rna-NM_001183883.1_ThermosaccDry | cds-NP_015256.1_ThermosaccDry | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005470.1:421607-422614:- | gene-YPL069C_VR1 | rna-NM_001183883.1_VR1 | cds-NP_015256.1_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000033.1:405914-406921:- | gene-YPL069C_ZTW1 | rna-NM_001183883.1_ZTW1 | cds-NP_015256.1_ZTW1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047502.1:407628-408635:- | gene-YPL069C_Sparadoxus | rna-NM_001183883.1_Sparadoxus | cds-NP_015256.1_Sparadoxus | 93.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |