Gene name: BSD2
Reference locus (S288C): YBR290W
Gene biotype: protein_coding
Description: Heavy metal ion homeostasis protein; facilitates trafficking of Smf1p and Smf2p metal transporters to vacuole where they are degraded; acts as an adaptor protein with Rsp5p in the regulated endocytosis of Smf1p and is itself ubiquitylated by Rsp5p; controls metal ion transport, prevents metal hyperaccumulation, functions in copper detoxification; Belongs to the BSD2 family
Top 10 interactors (score): RSP5 (0.998); SMF1 (0.965); TRE1 (0.965); SMF2 (0.902); TUL1 (0.844); SSL2 (0.825); PMR1 (0.82); SOD1 (0.799); ATX2 (0.788); ATX1 (0.782); TKL1 (0.782); ISU1 (0.78); CPS1 (0.758); TFB4 (0.747); SNA3 (0.746); BUL1 (0.71); PPN1 (0.698); SSH4 (0.695); UGA1 (0.686); SMX3 (0.673)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005296.1:766917-767882:+ | gene-YBR290W_AKU4011 | rna-NM_001178638.1_AKU4011 | cds-NP_009849.1_AKU4011 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000066.1:137914-138879:+ | gene-YBR290W_BG1 | rna-NM_001178638.1_BG1 | cds-NP_009849.1_BG1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005504.1:767995-768960:+ | gene-YBR290W_Bruggeman | rna-NM_001178638.1_Bruggeman | cds-NP_009849.1_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005520.1:771748-772713:+ | gene-YBR290W_CAT1 | rna-NM_001178638.1_CAT1 | cds-NP_009849.1_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005360.1:758483-759448:+ | gene-YBR290W_CBS1585 | rna-NM_001178638.1_CBS1585 | cds-NP_009849.1_CBS1585 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005344.1:764876-765841:+ | gene-YBR290W_CBS436 | rna-NM_001178638.1_CBS436 | cds-NP_009849.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005328.1:853033-853998:+ | gene-YBR290W_CBS6412 | rna-NM_001178638.1_CBS6412 | cds-NP_009849.1_CBS6412 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005312.1:764514-765479:+ | gene-YBR290W_CBS6413 | rna-NM_001178638.1_CBS6413 | cds-NP_009849.1_CBS6413 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001523.1:776490-777455:+ | gene-YBR290W_CENPK1137D | rna-NM_001178638.1_CENPK1137D | cds-NP_009849.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005472.1:889950-890915:+ | gene-YBR290W_EthanolRed | rna-NM_001178638.1_EthanolRed | cds-NP_009849.1_EthanolRed | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005536.1:783297-784262:+ | gene-YBR290W_FaliES1 | rna-NM_001178638.1_FaliES1 | cds-NP_009849.1_FaliES1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000067.1:19913-20878:- | gene-YBR290W_JAY291 | rna-NM_001178638.1_JAY291 | cds-NP_009849.1_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005408.1:770060-771025:+ | gene-YBR290W_MUCL30387 | rna-NM_001178638.1_MUCL30387 | cds-NP_009849.1_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005440.1:787147-788112:+ | gene-YBR290W_MUCL30388 | rna-NM_001178638.1_MUCL30388 | cds-NP_009849.1_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005280.1:756790-757755:+ | gene-YBR290W_MUCL39482 | rna-NM_001178638.1_MUCL39482 | cds-NP_009849.1_MUCL39482 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005424.1:766606-767571:+ | gene-YBR290W_MUCL42920 | rna-NM_001178638.1_MUCL42920 | cds-NP_009849.1_MUCL42920 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011811.1:782388-783353:+ | gene-YBR290W_NCIM3186 | rna-NM_001178638.1_NCIM3186 | cds-NP_009849.1_NCIM3186 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005264.1:758679-759644:+ | gene-YBR290W_NCYC1407 | rna-NM_001178638.1_NCYC1407 | cds-NP_009849.1_NCYC1407 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994141.1:781774-782739:+ | gene-YBR290W_PE2H3 | rna-NM_001178638.1_PE2H3 | cds-NP_009849.1_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999873.1:779450-780415:+ | gene-YBR290W_PE2H4 | rna-NM_001178638.1_PE2H4 | cds-NP_009849.1_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001134.8:782591-783556:+ | gene-YBR290W_S288C | rna-NM_001178638.1_S288C | cds-NP_009849.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000019.1:137730-138695:+ | gene-YBR290W_SA1 | rna-NM_001178638.1_SA1 | cds-NP_009849.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005488.1:782289-783254:+ | gene-YBR290W_ThermosaccDry | rna-NM_001178638.1_ThermosaccDry | cds-NP_009849.1_ThermosaccDry | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005456.1:762474-763439:+ | gene-YBR290W_VR1 | rna-NM_001178638.1_VR1 | cds-NP_009849.1_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000003.1:755107-756072:+ | gene-YBR290W_ZTW1 | rna-NM_001178638.1_ZTW1 | cds-NP_009849.1_ZTW1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047488.1:798917-799885:+ | gene-YBR290W_Sparadoxus | rna-NM_001178638.1_Sparadoxus | cds-NP_009849.1_Sparadoxus | 91.1 | 99.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |