BSC6 (YOL137W)


Gene profile

Gene name: BSC6
Reference locus (S288C): YOL137W
Gene biotype: protein_coding

Description: Bypass of stop codon protein 6; Protein of unknown function with 8 putative transmembrane segments; ORF exhibits genomic organization compatible with a translational readthrough-dependent mode of expression

Top 10 interactors (score): YER084W (0.771); YGR017W (0.747); YIR014W (0.747); YJL163C (0.725); EFM6 (0.717); RNH203 (0.711); IES5 (0.71); SPC2 (0.7); FMP46 (0.699); CIP1 (0.695); SRP102 (0.692); STP3 (0.68); TED1 (0.669); PMP3 (0.636); SYC1 (0.619); QDR2 (0.618); GUP1 (0.618); RIB1 (0.617); LIP1 (0.612); EAF5 (0.595)

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005309.1:54279-55772:+ gene-YOL137W_AKU4011 rna-NM_001183391.1_AKU4011 cds-NP_014504.1_AKU4011 99.6 100.0 Verified 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000172.1:19900-21393:+ gene-YOL137W_BG1 rna-NM_001183391.1_BG1 cds-NP_014504.1_BG1 99.4 100.0 Verified 1 1 1 False True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005517.1:55556-57049:+ gene-YOL137W_Bruggeman rna-NM_001183391.1_Bruggeman cds-NP_014504.1_Bruggeman 99.7 100.0 Verified 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005533.1:54514-56007:+ gene-YOL137W_CAT1 rna-NM_001183391.1_CAT1 cds-NP_014504.1_CAT1 99.5 100.0 Verified 1 1 1 False True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005373.1:48753-50246:+ gene-YOL137W_CBS1585 rna-NM_001183391.1_CBS1585 cds-NP_014504.1_CBS1585 99.7 100.0 Verified 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005357.1:54602-56095:+ gene-YOL137W_CBS436 rna-NM_001183391.1_CBS436 cds-NP_014504.1_CBS436 99.3 100.0 Mismatch 1 1 1 False True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005341.1:48619-50112:+ gene-YOL137W_CBS6412 rna-NM_001183391.1_CBS6412 cds-NP_014504.1_CBS6412 99.6 100.0 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005325.1:55087-56580:+ gene-YOL137W_CBS6413 rna-NM_001183391.1_CBS6413 cds-NP_014504.1_CBS6413 99.6 100.0 Verified 1 1 1 False True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001536.1:65517-67010:+ gene-YOL137W_CENPK1137D rna-NM_001183391.1_CENPK1137D cds-NP_014504.1_CENPK1137D 99.5 100.0 Verified 1 1 1 False True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005485.1:52530-54023:+ gene-YOL137W_EthanolRed rna-NM_001183391.1_EthanolRed cds-NP_014504.1_EthanolRed 99.7 100.0 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005549.1:54559-56052:+ gene-YOL137W_FaliES1 rna-NM_001183391.1_FaliES1 cds-NP_014504.1_FaliES1 99.7 100.0 Verified 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000329.1:26502-27995:- gene-YOL137W_JAY291 rna-NM_001183391.1_JAY291 cds-NP_014504.1_JAY291 99.4 100.0 Verified 1 1 1 False True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005421.1:60196-61689:+ gene-YOL137W_MUCL30387 rna-NM_001183391.1_MUCL30387 cds-NP_014504.1_MUCL30387 99.7 100.0 Verified 1 1 1 False True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005453.1:63190-64683:+ gene-YOL137W_MUCL30388 rna-NM_001183391.1_MUCL30388 cds-NP_014504.1_MUCL30388 99.7 100.0 Verified 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005293.1:56688-58181:+ gene-YOL137W_MUCL39482 rna-NM_001183391.1_MUCL39482 cds-NP_014504.1_MUCL39482 99.6 100.0 Verified 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005437.1:72576-74069:+ gene-YOL137W_MUCL42920 rna-NM_001183391.1_MUCL42920 cds-NP_014504.1_MUCL42920 99.7 100.0 Verified 1 1 1 False True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011824.1:65510-67003:+ gene-YOL137W_NCIM3186 rna-NM_001183391.1_NCIM3186 cds-NP_014504.1_NCIM3186 99.4 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005277.1:62729-64222:+ gene-YOL137W_NCYC1407 rna-NM_001183391.1_NCYC1407 cds-NP_014504.1_NCYC1407 99.6 100.0 Verified 1 1 1 False True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994154.1:41155-42648:+ gene-YOL137W_PE2H3 rna-NM_001183391.1_PE2H3 cds-NP_014504.1_PE2H3 99.4 100.0 Verified 1 1 1 False True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999886.1:58103-59596:+ gene-YOL137W_PE2H4 rna-NM_001183391.1_PE2H4 cds-NP_014504.1_PE2H4 99.4 100.0 Verified 1 1 1 False True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001147.6:65621-67114:+ gene-YOL137W_S288C rna-NM_001183391.1_S288C cds-NP_014504.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000001.1:39052-40545:+ gene-YOL137W_SA1 rna-NM_001183391.1_SA1 cds-NP_014504.1_SA1 99.3 100.0 Verified 1 1 1 False True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005501.1:53697-55190:+ gene-YOL137W_ThermosaccDry rna-NM_001183391.1_ThermosaccDry cds-NP_014504.1_ThermosaccDry 99.7 100.0 Verified 1 1 1 False True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005469.1:54353-55846:+ gene-YOL137W_VR1 rna-NM_001183391.1_VR1 cds-NP_014504.1_VR1 99.3 100.0 Verified 1 1 1 False True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000031.1:53451-54944:+ gene-YOL137W_ZTW1 rna-NM_001183391.1_ZTW1 cds-NP_014504.1_ZTW1 99.7 100.0 Verified 1 1 1 False True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047501.1:55921-57414:+ gene-YOL137W_Sparadoxus rna-NM_001183391.1_Sparadoxus cds-NP_014504.1_Sparadoxus 89.4 99.7 Verified 1 1 1 False True False False False

Additional files