Gene name: BSC2
Reference locus (S288C): YDR275W
Gene biotype: protein_coding
Description: Bypass of stop codon protein 2; Protein of unknown function; ORF exhibits genomic organization compatible with a translational readthrough-dependent mode of expression; null mutant displays increased translation rate and increased readthrough of premature stop codons; BSC2 has a paralog, IRC23, that arose from the whole genome duplication
Top 10 interactors (score): YNL040W (0.942); MCH1 (0.746); MUM3 (0.717); RRT8 (0.715); CUZ1 (0.696); SPO23 (0.674); PMP3 (0.617); OLA1 (0.573); SDT1 (0.572); ZPS1 (0.568); PET10 (0.566); SPO1 (0.553); FAT1 (0.499); YEH1 (0.481); TGL5 (0.45); YDR510C-A (0.45); PRP5 (0.4); CWH41 (0.4); ECM29 (0.4); RMA1 (0.4)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005298.1:964551-965258:+ | gene-YDR275W_AKU4011 | rna-NM_001180583.1_AKU4011 | cds-NP_010561.1_AKU4011 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000080.1:167072-167779:- | gene-YDR275W_BG1 | rna-NM_001180583.1_BG1 | cds-NP_010561.1_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005506.1:990704-991411:+ | gene-YDR275W_Bruggeman | rna-NM_001180583.1_Bruggeman | cds-NP_010561.1_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005522.1:978834-979541:+ | gene-YDR275W_CAT1 | rna-NM_001180583.1_CAT1 | cds-NP_010561.1_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005362.1:958996-959703:+ | gene-YDR275W_CBS1585 | rna-NM_001180583.1_CBS1585 | cds-NP_010561.1_CBS1585 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005346.1:977025-977732:+ | gene-YDR275W_CBS436 | rna-NM_001180583.1_CBS436 | cds-NP_010561.1_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005330.1:955679-956386:+ | gene-YDR275W_CBS6412 | rna-NM_001180583.1_CBS6412 | cds-NP_010561.1_CBS6412 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005314.1:976915-977622:+ | gene-YDR275W_CBS6413 | rna-NM_001180583.1_CBS6413 | cds-NP_010561.1_CBS6413 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001525.1:1010898-1011605:+ | gene-YDR275W_CENPK1137D | rna-NM_001180583.1_CENPK1137D | cds-NP_010561.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005474.1:963097-963804:+ | gene-YDR275W_EthanolRed | rna-NM_001180583.1_EthanolRed | cds-NP_010561.1_EthanolRed | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005538.1:971299-972006:+ | gene-YDR275W_FaliES1 | rna-NM_001180583.1_FaliES1 | cds-NP_010561.1_FaliES1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000176.1:19553-20260:+ | gene-YDR275W_JAY291 | rna-NM_001180583.1_JAY291 | cds-NP_010561.1_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005410.1:976750-977457:+ | gene-YDR275W_MUCL30387 | rna-NM_001180583.1_MUCL30387 | cds-NP_010561.1_MUCL30387 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005442.1:964064-964771:+ | gene-YDR275W_MUCL30388 | rna-NM_001180583.1_MUCL30388 | cds-NP_010561.1_MUCL30388 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005282.1:950802-951509:+ | gene-YDR275W_MUCL39482 | rna-NM_001180583.1_MUCL39482 | cds-NP_010561.1_MUCL39482 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005426.1:890794-891501:+ | gene-YDR275W_MUCL42920 | rna-NM_001180583.1_MUCL42920 | cds-NP_010561.1_MUCL42920 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011813.1:1012175-1012882:+ | gene-YDR275W_NCIM3186 | rna-NM_001180583.1_NCIM3186 | cds-NP_010561.1_NCIM3186 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005266.1:964092-964799:+ | gene-YDR275W_NCYC1407 | rna-NM_001180583.1_NCYC1407 | cds-NP_010561.1_NCYC1407 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994143.1:974743-975450:+ | gene-YDR275W_PE2H3 | rna-NM_001180583.1_PE2H3 | cds-NP_010561.1_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999875.1:979997-980704:+ | gene-YDR275W_PE2H4 | rna-NM_001180583.1_PE2H4 | cds-NP_010561.1_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001136.10:1012252-1012959:+ | gene-YDR275W_S288C | rna-NM_001180583.1_S288C | cds-NP_010561.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000102.1:19878-20585:+ | gene-YDR275W_SA1 | rna-NM_001180583.1_SA1 | cds-NP_010561.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005490.1:975584-976291:+ | gene-YDR275W_ThermosaccDry | rna-NM_001180583.1_ThermosaccDry | cds-NP_010561.1_ThermosaccDry | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005458.1:991177-991884:+ | gene-YDR275W_VR1 | rna-NM_001180583.1_VR1 | cds-NP_010561.1_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000008.1:19710-20417:+ | gene-YDR275W_ZTW1 | rna-NM_001180583.1_ZTW1 | cds-NP_010561.1_ZTW1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047490.1:972011-972718:+ | gene-YDR275W_Sparadoxus | rna-NM_001180583.1_Sparadoxus | cds-NP_010561.1_Sparadoxus | 87.5 | 99.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |