Gene name: BRL1
Reference locus (S288C): YHR036W
Gene biotype: protein_coding
Description: Nucleus export protein BRL1; Essential nuclear envelope/ER integral membrane protein; interacts and functions with Apq12p and Brr6p in lipid homeostasis; mutants are defective in nuclear pore complex biogenesis, mRNA nuclear export and are sensitive to sterol biosynthesis inhibitors and membrane fluidizing agents; identified as a dosage suppressor of a temperature sensitive mutation in the major karyopherin, CRM1; homologous to Brr6p; Belongs to the BRL1/BRR6 family
Top 10 interactors (score): SRM1 (0.779); CRM1 (0.772); BRR6 (0.763); SPT15 (0.499); BRF1 (0.495); GLE2 (0.428); MNN11 (0.416); NUP116 (0.408)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005302.1:168615-170030:+ | gene-YHR036W_AKU4011 | rna-NM_001179166.1_AKU4011 | cds-NP_011901.1_AKU4011 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000053.1:88820-90235:+ | gene-YHR036W_BG1 | rna-NM_001179166.1_BG1 | cds-NP_011901.1_BG1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005510.1:176054-177469:+ | gene-YHR036W_Bruggeman | rna-NM_001179166.1_Bruggeman | cds-NP_011901.1_Bruggeman | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005526.1:170439-171854:+ | gene-YHR036W_CAT1 | rna-NM_001179166.1_CAT1 | cds-NP_011901.1_CAT1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005366.1:168987-170402:+ | gene-YHR036W_CBS1585 | rna-NM_001179166.1_CBS1585 | cds-NP_011901.1_CBS1585 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005350.1:163222-164637:+ | gene-YHR036W_CBS436 | rna-NM_001179166.1_CBS436 | cds-NP_011901.1_CBS436 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005328.1:167949-169364:+ | gene-YHR036W_CBS6412 | rna-NM_001179166.1_CBS6412 | cds-NP_011901.1_CBS6412 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005318.1:168794-170209:+ | gene-YHR036W_CBS6413 | rna-NM_001179166.1_CBS6413 | cds-NP_011901.1_CBS6413 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001529.1:173606-175021:+ | gene-YHR036W_CENPK1137D | rna-NM_001179166.1_CENPK1137D | cds-NP_011901.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005478.1:168119-169534:+ | gene-YHR036W_EthanolRed | rna-NM_001179166.1_EthanolRed | cds-NP_011901.1_EthanolRed | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005542.1:169098-170513:+ | gene-YHR036W_FaliES1 | rna-NM_001179166.1_FaliES1 | cds-NP_011901.1_FaliES1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000273.1:11135-12550:- | gene-YHR036W_JAY291 | rna-NM_001179166.1_JAY291 | cds-NP_011901.1_JAY291 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005414.1:175123-176538:+ | gene-YHR036W_MUCL30387 | rna-NM_001179166.1_MUCL30387 | cds-NP_011901.1_MUCL30387 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005446.1:175593-177008:+ | gene-YHR036W_MUCL30388 | rna-NM_001179166.1_MUCL30388 | cds-NP_011901.1_MUCL30388 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005286.1:168024-169439:+ | gene-YHR036W_MUCL39482 | rna-NM_001179166.1_MUCL39482 | cds-NP_011901.1_MUCL39482 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005430.1:174683-176098:+ | gene-YHR036W_MUCL42920 | rna-NM_001179166.1_MUCL42920 | cds-NP_011901.1_MUCL42920 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011817.1:180227-181642:+ | gene-YHR036W_NCIM3186 | rna-NM_001179166.1_NCIM3186 | cds-NP_011901.1_NCIM3186 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005270.1:167887-169302:+ | gene-YHR036W_NCYC1407 | rna-NM_001179166.1_NCYC1407 | cds-NP_011901.1_NCYC1407 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994147.1:170217-171632:+ | gene-YHR036W_PE2H3 | rna-NM_001179166.1_PE2H3 | cds-NP_011901.1_PE2H3 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999879.1:177658-179073:+ | gene-YHR036W_PE2H4 | rna-NM_001179166.1_PE2H4 | cds-NP_011901.1_PE2H4 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001140.6:180345-181760:+ | gene-YHR036W_S288C | rna-NM_001179166.1_S288C | cds-NP_011901.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000014.1:176810-178225:- | gene-YHR036W_SA1 | rna-NM_001179166.1_SA1 | cds-NP_011901.1_SA1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005494.1:170187-171602:+ | gene-YHR036W_ThermosaccDry | rna-NM_001179166.1_ThermosaccDry | cds-NP_011901.1_ThermosaccDry | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005462.1:176708-178123:+ | gene-YHR036W_VR1 | rna-NM_001179166.1_VR1 | cds-NP_011901.1_VR1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000017.1:161738-163153:+ | gene-YHR036W_ZTW1 | rna-NM_001179166.1_ZTW1 | cds-NP_011901.1_ZTW1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047494.1:167809-169224:+ | gene-YHR036W_Sparadoxus | rna-NM_001179166.1_Sparadoxus | cds-NP_011901.1_Sparadoxus | 90.3 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |