Gene name: BRE5
Reference locus (S288C): YNR051C
Gene biotype: protein_coding
Description: UBP3-associated protein BRE5; Ubiquitin protease cofactor; forms deubiquitination complex with Ubp3p that coregulates anterograde and retrograde transport between the endoplasmic reticulum and Golgi compartments; null is sensitive to brefeldin A
Top 10 interactors (score): UBP3 (0.999); RLI1 (0.983); ECM10 (0.937); SSC1 (0.937); GIS2 (0.866); RSP5 (0.851); CDC48 (0.838); PBP1 (0.812); DOA1 (0.805); YGR054W (0.774); PUF3 (0.768); RVB2 (0.756); PAB1 (0.753); VPS72 (0.753); PRT1 (0.752); NTF2 (0.751); CLU1 (0.75); SSQ1 (0.727); UBP2 (0.706); YPL247C (0.687)
Homologues (species, bitscore): ENSDARP00000116124 (Danio rerio, 53.5); g3bp1 (Xenopus tropicalis, 52.8)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005307.1:233172-234719:+ | gene-YNR051C_AKU4011 | rna-NM_001183228.1_AKU4011 | cds-NP_014449.1_AKU4011 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000155.1:608316-609863:- | gene-YNR051C_BG1 | rna-NM_001183228.1_BG1 | cds-NP_014449.1_BG1 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005516.1:718101-719648:- | gene-YNR051C_Bruggeman | rna-NM_001183228.1_Bruggeman | cds-NP_014449.1_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005532.1:752067-753614:- | gene-YNR051C_CAT1 | rna-NM_001183228.1_CAT1 | cds-NP_014449.1_CAT1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005372.1:706318-707865:- | gene-YNR051C_CBS1585 | rna-NM_001183228.1_CBS1585 | cds-NP_014449.1_CBS1585 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005356.1:767863-769410:- | gene-YNR051C_CBS436 | rna-NM_001183228.1_CBS436 | cds-NP_014449.1_CBS436 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005340.1:695296-696843:- | gene-YNR051C_CBS6412 | rna-NM_001183228.1_CBS6412 | cds-NP_014449.1_CBS6412 | 98.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005324.1:696981-698528:- | gene-YNR051C_CBS6413 | rna-NM_001183228.1_CBS6413 | cds-NP_014449.1_CBS6413 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001535.1:710520-712067:- | gene-YNR051C_CENPK1137D | rna-NM_001183228.1_CENPK1137D | cds-NP_014449.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005484.1:701958-703505:- | gene-YNR051C_EthanolRed | rna-NM_001183228.1_EthanolRed | cds-NP_014449.1_EthanolRed | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005548.1:693161-694708:- | gene-YNR051C_FaliES1 | rna-NM_001183228.1_FaliES1 | cds-NP_014449.1_FaliES1 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000037.1:7931-9478:+ | gene-YNR051C_JAY291 | rna-NM_001183228.1_JAY291 | cds-NP_014449.1_JAY291 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005420.1:716029-717576:- | gene-YNR051C_MUCL30387 | rna-NM_001183228.1_MUCL30387 | cds-NP_014449.1_MUCL30387 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005452.1:757088-758635:- | gene-YNR051C_MUCL30388 | rna-NM_001183228.1_MUCL30388 | cds-NP_014449.1_MUCL30388 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005292.1:697787-699334:- | gene-YNR051C_MUCL39482 | rna-NM_001183228.1_MUCL39482 | cds-NP_014449.1_MUCL39482 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005436.1:702502-704049:- | gene-YNR051C_MUCL42920 | rna-NM_001183228.1_MUCL42920 | cds-NP_014449.1_MUCL42920 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011823.1:716749-718296:- | gene-YNR051C_NCIM3186 | rna-NM_001183228.1_NCIM3186 | cds-NP_014449.1_NCIM3186 | 98.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005276.1:700305-701852:- | gene-YNR051C_NCYC1407 | rna-NM_001183228.1_NCYC1407 | cds-NP_014449.1_NCYC1407 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994153.1:701169-702716:- | gene-YNR051C_PE2H3 | rna-NM_001183228.1_PE2H3 | cds-NP_014449.1_PE2H3 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999885.1:702571-704118:- | gene-YNR051C_PE2H4 | rna-NM_001183228.1_PE2H4 | cds-NP_014449.1_PE2H4 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001146.8:716780-718327:- | gene-YNR051C_S288C | rna-NM_001183228.1_S288C | cds-NP_014449.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000074.1:7996-9543:+ | gene-YNR051C_SA1 | rna-NM_001183228.1_SA1 | cds-NP_014449.1_SA1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005500.1:693498-695045:- | gene-YNR051C_ThermosaccDry | rna-NM_001183228.1_ThermosaccDry | cds-NP_014449.1_ThermosaccDry | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005468.1:735630-737177:- | gene-YNR051C_VR1 | rna-NM_001183228.1_VR1 | cds-NP_014449.1_VR1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000030.1:603272-604819:- | gene-YNR051C_ZTW1 | rna-NM_001183228.1_ZTW1 | cds-NP_014449.1_ZTW1 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047500.1:707752-709299:- | gene-YNR051C_Sparadoxus | rna-NM_001183228.1_Sparadoxus | cds-NP_014449.1_Sparadoxus | 88.8 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |