Gene name: BRE4
Reference locus (S288C): YDL231C
Gene biotype: protein_coding
Description: Protein bre4; Zinc finger protein containing five transmembrane domains; null mutant exhibits strongly fragmented vacuoles and sensitivity to brefeldin A, a drug which is known to affect intracellular transport
Top 10 interactors (score): OAR1 (0.61); ARI1 (0.575); OYE2 (0.489); ADH6 (0.45); MGM1 (0.45)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005298.1:21971-25348:- | gene-YDL231C_AKU4011 | rna-NM_001180291.1_AKU4011 | cds-NP_010050.1_AKU4011 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000077.1:41103-44480:+ | gene-YDL231C_BG1 | rna-NM_001180291.1_BG1 | cds-NP_010050.1_BG1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005506.1:37690-41067:- | gene-YDL231C_Bruggeman | rna-NM_001180291.1_Bruggeman | cds-NP_010050.1_Bruggeman | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005522.1:40609-43986:- | gene-YDL231C_CAT1 | rna-NM_001180291.1_CAT1 | cds-NP_010050.1_CAT1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005362.1:21346-24723:- | gene-YDL231C_CBS1585 | rna-NM_001180291.1_CBS1585 | cds-NP_010050.1_CBS1585 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005346.1:38112-41489:- | gene-YDL231C_CBS436 | rna-NM_001180291.1_CBS436 | cds-NP_010050.1_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005330.1:21849-25226:- | gene-YDL231C_CBS6412 | rna-NM_001180291.1_CBS6412 | cds-NP_010050.1_CBS6412 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005314.1:38731-42108:- | gene-YDL231C_CBS6413 | rna-NM_001180291.1_CBS6413 | cds-NP_010050.1_CBS6413 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001525.1:37835-41212:- | gene-YDL231C_CENPK1137D | rna-NM_001180291.1_CENPK1137D | cds-NP_010050.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005474.1:35562-38939:- | gene-YDL231C_EthanolRed | rna-NM_001180291.1_EthanolRed | cds-NP_010050.1_EthanolRed | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005538.1:38864-42241:- | gene-YDL231C_FaliES1 | rna-NM_001180291.1_FaliES1 | cds-NP_010050.1_FaliES1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000011.1:2282-5659:+ | gene-YDL231C_JAY291 | rna-NM_001180291.1_JAY291 | cds-NP_010050.1_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005410.1:36985-40362:- | gene-YDL231C_MUCL30387 | rna-NM_001180291.1_MUCL30387 | cds-NP_010050.1_MUCL30387 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005442.1:26552-29929:- | gene-YDL231C_MUCL30388 | rna-NM_001180291.1_MUCL30388 | cds-NP_010050.1_MUCL30388 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005282.1:21940-25317:- | gene-YDL231C_MUCL39482 | rna-NM_001180291.1_MUCL39482 | cds-NP_010050.1_MUCL39482 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005426.1:38123-41500:- | gene-YDL231C_MUCL42920 | rna-NM_001180291.1_MUCL42920 | cds-NP_010050.1_MUCL42920 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011813.1:38790-42167:- | gene-YDL231C_NCIM3186 | rna-NM_001180291.1_NCIM3186 | cds-NP_010050.1_NCIM3186 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005266.1:21896-25273:- | gene-YDL231C_NCYC1407 | rna-NM_001180291.1_NCYC1407 | cds-NP_010050.1_NCYC1407 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994143.1:29182-32559:- | gene-YDL231C_PE2H3 | rna-NM_001180291.1_PE2H3 | cds-NP_010050.1_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999875.1:29192-32569:- | gene-YDL231C_PE2H4 | rna-NM_001180291.1_PE2H4 | cds-NP_010050.1_PE2H4 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001136.10:38867-42244:- | gene-YDL231C_S288C | rna-NM_001180291.1_S288C | cds-NP_010050.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000107.1:2067-5444:+ | gene-YDL231C_SA1 | rna-NM_001180291.1_SA1 | cds-NP_010050.1_SA1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005490.1:38992-42369:- | gene-YDL231C_ThermosaccDry | rna-NM_001180291.1_ThermosaccDry | cds-NP_010050.1_ThermosaccDry | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005458.1:38918-42295:- | gene-YDL231C_VR1 | rna-NM_001180291.1_VR1 | cds-NP_010050.1_VR1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000006.1:38051-41427:- | gene-YDL231C_ZTW1 | rna-NM_001180291.1_ZTW1 | cds-NP_010050.1_ZTW1 | 99.5 | 99.9 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047490.1:41343-44720:- | gene-YDL231C_Sparadoxus | rna-NM_001180291.1_Sparadoxus | cds-NP_010050.1_Sparadoxus | 90.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |