Gene name: BIO3
Reference locus (S288C): YNR058W
Gene biotype: protein_coding
Description: 7,8-diamino-pelargonic acid aminotransferase (DAPA); catalyzes the second step in the biotin biosynthesis pathway; BIO3 is in a cluster of 3 genes (BIO3, BIO4, and BIO5) that mediate biotin synthesis; BIO3 and BIO4 were acquired by horizontal gene transfer (HGT) from bacteria; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. BioA subfamily
Top 10 interactors (score): BIO4 (0.999); BIO2 (0.998); BIO5 (0.997); ARG5,6 (0.98); VHT1 (0.964); AAD10 (0.92); YJR154W (0.908); ARG4 (0.793); UGA1 (0.749); ARG3 (0.749); YPL245W (0.746); ARG2 (0.725); ARG1 (0.708); DUG1 (0.677); VHR1 (0.674); HIS4 (0.648); ARG7 (0.647); HEM2 (0.636); HEM12 (0.634); TRP3 (0.62)
Homologues (species, bitscore): OAT (Homo sapiens, 84.0); Oat (Mus musculus, 84.3); oat (Danio rerio, 81.6); oat.1 (Xenopus tropicalis, 89.0); Oat (Drosophila melanogaster, 94.0); C16A3.10 (Caenorhabditis elegans, 93.2); POP2 (Arabidopsis thaliana, 114.8)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005307.1:216418-217860:- | gene-YNR058W_AKU4011 | rna-NM_001183235.1_AKU4011 | cds-NP_014456.1_AKU4011 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000155.1:625862-627304:+ | gene-YNR058W_BG1 | rna-NM_001183235.1_BG1 | cds-NP_014456.1_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005516.1:736022-737464:+ | gene-YNR058W_Bruggeman | rna-NM_001183235.1_Bruggeman | cds-NP_014456.1_Bruggeman | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005532.1:770465-771907:+ | gene-YNR058W_CAT1 | rna-NM_001183235.1_CAT1 | cds-NP_014456.1_CAT1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005372.1:723178-724620:+ | gene-YNR058W_CBS1585 | rna-NM_001183235.1_CBS1585 | cds-NP_014456.1_CBS1585 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005356.1:786037-787479:+ | gene-YNR058W_CBS436 | rna-NM_001183235.1_CBS436 | cds-NP_014456.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005340.1:712160-713602:+ | gene-YNR058W_CBS6412 | rna-NM_001183235.1_CBS6412 | cds-NP_014456.1_CBS6412 | 99.3 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005324.1:713841-715283:+ | gene-YNR058W_CBS6413 | rna-NM_001183235.1_CBS6413 | cds-NP_014456.1_CBS6413 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001535.1:727927-729369:+ | gene-YNR058W_CENPK1137D | rna-NM_001183235.1_CENPK1137D | cds-NP_014456.1_CENPK1137D | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005484.1:718819-720261:+ | gene-YNR058W_EthanolRed | rna-NM_001183235.1_EthanolRed | cds-NP_014456.1_EthanolRed | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005548.1:710011-711453:+ | gene-YNR058W_FaliES1 | rna-NM_001183235.1_FaliES1 | cds-NP_014456.1_FaliES1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000005.1:16283-17725:- | gene-YNR058W_JAY291 | rna-NM_001183235.1_JAY291 | cds-NP_014456.1_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005420.1:733981-735423:+ | gene-YNR058W_MUCL30387 | rna-NM_001183235.1_MUCL30387 | cds-NP_014456.1_MUCL30387 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005452.1:775589-777031:+ | gene-YNR058W_MUCL30388 | rna-NM_001183235.1_MUCL30388 | cds-NP_014456.1_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005292.1:714644-716086:+ | gene-YNR058W_MUCL39482 | rna-NM_001183235.1_MUCL39482 | cds-NP_014456.1_MUCL39482 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005436.1:721037-722479:+ | gene-YNR058W_MUCL42920 | rna-NM_001183235.1_MUCL42920 | cds-NP_014456.1_MUCL42920 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011823.1:734260-735702:+ | gene-YNR058W_NCIM3186 | rna-NM_001183235.1_NCIM3186 | cds-NP_014456.1_NCIM3186 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005276.1:717160-718602:+ | gene-YNR058W_NCYC1407 | rna-NM_001183235.1_NCYC1407 | cds-NP_014456.1_NCYC1407 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994153.1:718711-720153:+ | gene-YNR058W_PE2H3 | rna-NM_001183235.1_PE2H3 | cds-NP_014456.1_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999885.1:720113-721555:+ | gene-YNR058W_PE2H4 | rna-NM_001183235.1_PE2H4 | cds-NP_014456.1_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001146.8:734291-735733:+ | gene-YNR058W_S288C | rna-NM_001183235.1_S288C | cds-NP_014456.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000087.1:34114-35556:- | gene-YNR058W_SA1 | rna-NM_001183235.1_SA1 | cds-NP_014456.1_SA1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005500.1:710354-711796:+ | gene-YNR058W_ThermosaccDry | rna-NM_001183235.1_ThermosaccDry | cds-NP_014456.1_ThermosaccDry | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005468.1:753599-755041:+ | gene-YNR058W_VR1 | rna-NM_001183235.1_VR1 | cds-NP_014456.1_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000030.1:620120-621562:+ | gene-YNR058W_ZTW1 | rna-NM_001183235.1_ZTW1 | cds-NP_014456.1_ZTW1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047500.1:724369-725811:+ | gene-YNR058W_Sparadoxus | rna-NM_001183235.1_Sparadoxus | cds-NP_014456.1_Sparadoxus | 91.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |