Gene name: BIM1
Reference locus (S288C): YER016W
Gene biotype: protein_coding
Description: Microtubule-associated protein, rp/eb family; Protein BIM1; Microtubule plus end-tracking protein; together with Kar9p makes up the cortical microtubule capture site and delays the exit from mitosis when the spindle is oriented abnormally; homolog of human end binding protein 1 (EB1); Belongs to the MAPRE family
Top 10 interactors (score): TUB2 (0.999); KAR9 (0.999); STU2 (0.999); BIK1 (0.999); KIP2 (0.999); TUB3 (0.998); TUB1 (0.998); PAC1 (0.997); NIP100 (0.996); KIP3 (0.996); IPL1 (0.996); KAR3 (0.994); DYN1 (0.99); MYO2 (0.986); NDC80 (0.982); STU1 (0.978); CIN8 (0.972); ASE1 (0.969); SLI15 (0.945); BUD6 (0.939)
Homologues (species, bitscore): MAPRE1 (Homo sapiens, 153.7); Mapre1 (Mus musculus, 154.5); mapre1a (Danio rerio, 167.9); mapre1 (Xenopus tropicalis, 145.2); Eb1 (Drosophila melanogaster, 139.8); ebp-1 (Caenorhabditis elegans, 129.0); EB1C (Arabidopsis thaliana, 140.6)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005299.1:182311-183345:+ | gene-YER016W_AKU4011 | rna-NM_001178907.1_AKU4011 | cds-NP_010932.1_AKU4011 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000011.1:242743-243777:- | gene-YER016W_BG1 | rna-NM_001178907.1_BG1 | cds-NP_010932.1_BG1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005507.1:190168-191202:+ | gene-YER016W_Bruggeman | rna-NM_001178907.1_Bruggeman | cds-NP_010932.1_Bruggeman | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005523.1:185058-186092:+ | gene-YER016W_CAT1 | rna-NM_001178907.1_CAT1 | cds-NP_010932.1_CAT1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005363.1:182234-183268:+ | gene-YER016W_CBS1585 | rna-NM_001178907.1_CBS1585 | cds-NP_010932.1_CBS1585 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005347.1:183819-184853:+ | gene-YER016W_CBS436 | rna-NM_001178907.1_CBS436 | cds-NP_010932.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005331.1:182478-183512:+ | gene-YER016W_CBS6412 | rna-NM_001178907.1_CBS6412 | cds-NP_010932.1_CBS6412 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005315.1:187264-188298:+ | gene-YER016W_CBS6413 | rna-NM_001178907.1_CBS6413 | cds-NP_010932.1_CBS6413 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001526.1:186128-187162:+ | gene-YER016W_CENPK1137D | rna-NM_001178907.1_CENPK1137D | cds-NP_010932.1_CENPK1137D | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005475.1:182937-183971:+ | gene-YER016W_EthanolRed | rna-NM_001178907.1_EthanolRed | cds-NP_010932.1_EthanolRed | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005539.1:183197-184231:+ | gene-YER016W_FaliES1 | rna-NM_001178907.1_FaliES1 | cds-NP_010932.1_FaliES1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000024.1:49822-50856:+ | gene-YER016W_JAY291 | rna-NM_001178907.1_JAY291 | cds-NP_010932.1_JAY291 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005411.1:186361-187395:+ | gene-YER016W_MUCL30387 | rna-NM_001178907.1_MUCL30387 | cds-NP_010932.1_MUCL30387 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005443.1:182636-183670:+ | gene-YER016W_MUCL30388 | rna-NM_001178907.1_MUCL30388 | cds-NP_010932.1_MUCL30388 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005283.1:181277-182311:+ | gene-YER016W_MUCL39482 | rna-NM_001178907.1_MUCL39482 | cds-NP_010932.1_MUCL39482 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005427.1:187392-188426:+ | gene-YER016W_MUCL42920 | rna-NM_001178907.1_MUCL42920 | cds-NP_010932.1_MUCL42920 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011814.1:188276-189310:+ | gene-YER016W_NCIM3186 | rna-NM_001178907.1_NCIM3186 | cds-NP_010932.1_NCIM3186 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005267.1:186349-187383:+ | gene-YER016W_NCYC1407 | rna-NM_001178907.1_NCYC1407 | cds-NP_010932.1_NCYC1407 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994144.1:190661-191695:+ | gene-YER016W_PE2H3 | rna-NM_001178907.1_PE2H3 | cds-NP_010932.1_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999876.1:186564-187598:+ | gene-YER016W_PE2H4 | rna-NM_001178907.1_PE2H4 | cds-NP_010932.1_PE2H4 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001137.3:188277-189311:+ | gene-YER016W_S288C | rna-NM_001178907.1_S288C | cds-NP_010932.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000020.1:54373-55407:- | gene-YER016W_SA1 | rna-NM_001178907.1_SA1 | cds-NP_010932.1_SA1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005491.1:183968-185002:+ | gene-YER016W_ThermosaccDry | rna-NM_001178907.1_ThermosaccDry | cds-NP_010932.1_ThermosaccDry | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005459.1:182720-183754:+ | gene-YER016W_VR1 | rna-NM_001178907.1_VR1 | cds-NP_010932.1_VR1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000009.1:181180-182215:+ | gene-YER016W_ZTW1 | rna-NM_001178907.1_ZTW1 | cds-NP_010932.1_ZTW1 | 99.5 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047491.1:184957-185991:+ | gene-YER016W_Sparadoxus | rna-NM_001178907.1_Sparadoxus | cds-NP_010932.1_Sparadoxus | 90.7 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |