Gene name: BIK1
Reference locus (S288C): YCL029C
Gene biotype: protein_coding
Description: Nuclear fusion protein BIK1; Microtubule-associated protein; component of the interface between microtubules and kinetochore, involved in sister chromatid separation; essential in polyploid cells but not in haploid or diploid cells; ortholog of mammalian CLIP-170
Top 10 interactors (score): BIM1 (0.999); KIP2 (0.999); STU2 (0.998); PAC1 (0.996); DYN1 (0.993); KAR9 (0.984); KEL2 (0.972); KEL1 (0.97); TUB3 (0.965); CIN8 (0.957); ASE1 (0.949); KAR3 (0.949); KIP3 (0.935); TUB1 (0.923); TUB2 (0.913); NIP100 (0.907); NDL1 (0.889); STU1 (0.884); CIN1 (0.874); NUM1 (0.861)
Homologues (species, bitscore): CLIP1 (Homo sapiens, 60.8); Clip1 (Mus musculus, 60.1); clip1a (Danio rerio, 57.8); KIF13A (Xenopus tropicalis, 63.9); CLIP-190 (Drosophila melanogaster, 53.1); M01A8.2 (Caenorhabditis elegans, 68.9)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005297.1:69962-71284:- | gene-YCL029C_AKU4011 | rna-NM_001178674.1_AKU4011 | cds-NP_009901.1_AKU4011 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000178.1:75828-77150:+ | gene-YCL029C_BG1 | rna-NM_001178674.1_BG1 | cds-NP_009901.1_BG1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005505.1:58152-59474:- | gene-YCL029C_Bruggeman | rna-NM_001178674.1_Bruggeman | cds-NP_009901.1_Bruggeman | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005521.1:69760-71082:- | gene-YCL029C_CAT1 | rna-NM_001178674.1_CAT1 | cds-NP_009901.1_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005361.1:70651-71973:- | gene-YCL029C_CBS1585 | rna-NM_001178674.1_CBS1585 | cds-NP_009901.1_CBS1585 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005345.1:69093-70415:- | gene-YCL029C_CBS436 | rna-NM_001178674.1_CBS436 | cds-NP_009901.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005329.1:58059-59381:- | gene-YCL029C_CBS6412 | rna-NM_001178674.1_CBS6412 | cds-NP_009901.1_CBS6412 | 99.3 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005313.1:69427-70749:- | gene-YCL029C_CBS6413 | rna-NM_001178674.1_CBS6413 | cds-NP_009901.1_CBS6413 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001524.1:68196-69518:- | gene-YCL029C_CENPK1137D | rna-NM_001178674.1_CENPK1137D | cds-NP_009901.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005473.1:67985-69307:- | gene-YCL029C_EthanolRed | rna-NM_001178674.1_EthanolRed | cds-NP_009901.1_EthanolRed | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005537.1:68927-70249:- | gene-YCL029C_FaliES1 | rna-NM_001178674.1_FaliES1 | cds-NP_009901.1_FaliES1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000225.1:14137-15459:+ | gene-YCL029C_JAY291 | rna-NM_001178674.1_JAY291 | cds-NP_009901.1_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005409.1:56343-57665:- | gene-YCL029C_MUCL30387 | rna-NM_001178674.1_MUCL30387 | cds-NP_009901.1_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005441.1:56617-57939:- | gene-YCL029C_MUCL30388 | rna-NM_001178674.1_MUCL30388 | cds-NP_009901.1_MUCL30388 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005281.1:71020-72342:- | gene-YCL029C_MUCL39482 | rna-NM_001178674.1_MUCL39482 | cds-NP_009901.1_MUCL39482 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005425.1:57133-58455:- | gene-YCL029C_MUCL42920 | rna-NM_001178674.1_MUCL42920 | cds-NP_009901.1_MUCL42920 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011812.1:68231-69553:- | gene-YCL029C_NCIM3186 | rna-NM_001178674.1_NCIM3186 | cds-NP_009901.1_NCIM3186 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005265.1:71510-72832:- | gene-YCL029C_NCYC1407 | rna-NM_001178674.1_NCYC1407 | cds-NP_009901.1_NCYC1407 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994142.1:69052-70374:- | gene-YCL029C_PE2H3 | rna-NM_001178674.1_PE2H3 | cds-NP_009901.1_PE2H3 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999874.1:69009-70331:- | gene-YCL029C_PE2H4 | rna-NM_001178674.1_PE2H4 | cds-NP_009901.1_PE2H4 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001135.5:68599-69921:- | gene-YCL029C_S288C | rna-NM_001178674.1_S288C | cds-NP_009901.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000061.1:55736-57058:- | gene-YCL029C_SA1 | rna-NM_001178674.1_SA1 | cds-NP_009901.1_SA1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005489.1:69246-70568:- | gene-YCL029C_ThermosaccDry | rna-NM_001178674.1_ThermosaccDry | cds-NP_009901.1_ThermosaccDry | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005457.1:75542-76864:- | gene-YCL029C_VR1 | rna-NM_001178674.1_VR1 | cds-NP_009901.1_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000004.1:69441-70763:- | gene-YCL029C_ZTW1 | rna-NM_001178674.1_ZTW1 | cds-NP_009901.1_ZTW1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047489.1:98961-100283:- | gene-YCL029C_Sparadoxus | rna-NM_001178674.1_Sparadoxus | cds-NP_009901.1_Sparadoxus | 92.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |