BI4 (Q0120)

Gene profile

Gene name: BI4
Reference locus (S288C): Q0120
Gene biotype: protein_coding

Description: Mitochondrial mRNA maturase; forms a complex with Nam2p to mediate splicing of the bI4 intron of the COB gene; encoded by both exon and intron sequences of partially processed COB mRNA

Top 10 interactors (score): COX2 (0.999); COX3 (0.997); COX1 (0.993); RIP1 (0.993); CYT1 (0.991); AI1 (0.98); QCR9 (0.974); QCR6 (0.973); QCR7 (0.972); NAM2 (0.969); QCR8 (0.967); ATP6 (0.961); COX20 (0.959); AI5_ALPHA (0.958); CYC1 (0.951); CYC7 (0.951); COX6 (0.947); SDH2 (0.946); SDH3 (0.946); COX18 (0.946)

Homologues (species, bitscore): MT-CYB (Homo sapiens, 300.8); mt-Cytb (Mus musculus, 289.7); CYTB (Danio rerio, 301.2); CYTB (Xenopus tropicalis, 292.0); mt:Cyt-b (Drosophila melanogaster, 287.7); CYTB (Caenorhabditis elegans, 192.6); cob (Arabidopsis thaliana, 302.8)

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser

Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia MBVO01000055.1:27183-30756:+ gene-Q0120_AKU4011 rna-Q0120_AKU4011 cds-NP_009316.1_AKU4011 98.5 98.9 Unannotated 1 1 0 Unknown False False False False
Bruggeman GCA_001738585.1 Bread Not Applicable MBVY01000033.1:34098-39898:+ gene-Q0120_Bruggeman rna-Q0120_Bruggeman cds-NP_009316.1_Bruggeman 99.8 100.0 Unannotated 1 1 0 Unknown False False False False
CAT1 GCA_001738705.1 Bioethanol South America MBWC01000376.1:26521-30417:+ gene-Q0120_CAT1 rna-Q0120_CAT1 cds-NP_009316.1_CAT1 98.5 98.9 Unannotated 1 1 0 Unknown False False False False
CBS1585 GCA_001738375.1 Sake Asia MBVS01000067.1:27347-30907:+ gene-Q0120_CBS1585 rna-Q0120_CBS1585 cds-NP_009316.1_CBS1585 98.5 98.9 Unannotated 1 1 0 Unknown False False False False
CBS436 GCA_001738355.1 Sake Asia MBVR01000053.1:31907-37826:+ gene-Q0120_CBS436 rna-Q0120_CBS436 cds-NP_009316.1_CBS436 98.7 99.6 Unannotated 1 1 0 Unknown False False False False
CBS6412 GCA_001738345.1 Sake Asia MBVQ01000062.1:24320-27861:+ gene-Q0120_CBS6412 rna-Q0120_CBS6412 cds-NP_009316.1_CBS6412 98.7 98.9 Unannotated 1 1 0 Unknown False False False False
CBS6413 GCA_001738265.1 Sake Asia MBVP01000101.1:58213-63927:+ gene-Q0120_CBS6413 rna-Q0120_CBS6413 cds-NP_009316.1_CBS6413 99.5 100.0 Unannotated 1 1 0 Unknown False False False False
EthanolRed GCA_001738615.1 Bioethanol Asia MBWB01000074.1:23552-25468:+ gene-Q0120_EthanolRed rna-Q0120_EthanolRed cds-NP_009316.1_EthanolRed 95.4 95.8 Unannotated 1 1 0 Unknown False False False False
FaliES1 GCA_001738715.1 Bioethanol Asia MBWD01000016.1:31015-32931:+ gene-Q0120_FaliES1 rna-Q0120_FaliES1 cds-NP_009316.1_FaliES1 95.4 95.8 Unannotated 1 1 0 Unknown False False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000066.1:455-1911:+ gene-Q0120_JAY291 rna-Q0120_JAY291 cds-NP_009316.1_JAY291 73.9 74.8 Unannotated 1 1 0 Unknown False False False False
MUCL30387 GCA_001738515.1 Bread Europe MBVX01000168.1:30700-36748:+ gene-Q0120_MUCL30387 rna-Q0120_MUCL30387 cds-NP_009316.1_MUCL30387 99.8 100.0 Unannotated 1 1 0 Unknown False False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005439.1:186674-188130:+ gene-Q0120_MUCL30388 rna-Q0120_MUCL30388 cds-NP_009316.1_MUCL30388 74.2 74.8 Unannotated 1 1 0 Unknown False False False False
MUCL42920 GCA_001738485.1 Bread Europe MBVV01000309.1:33000-38791:+ gene-Q0120_MUCL42920 rna-Q0120_MUCL42920 cds-NP_009316.1_MUCL42920 99.8 100.0 Unannotated 1 1 0 Unknown False False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011826.1:36540-42251:+ gene-Q0120_NCIM3186 rna-Q0120_NCIM3186 cds-NP_009316.1_NCIM3186 85.4 95.8 Unannotated 1 1 0 Unknown False False False False
NCYC1407 GCA_001738225.1 Sake Asia MBVM01000021.1:33599-37136:+ gene-Q0120_NCYC1407 rna-Q0120_NCYC1407 cds-NP_009316.1_NCYC1407 98.7 98.9 Unannotated 1 1 0 Unknown False False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994156.1:29501-35293:+ gene-Q0120_PE2H3 rna-Q0120_PE2H3 cds-NP_009316.1_PE2H3 99.3 100.0 Unannotated 1 1 0 Unknown False False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999888.1:29501-35293:+ gene-Q0120_PE2H4 rna-Q0120_PE2H4 cds-NP_009316.1_PE2H4 99.3 100.0 Unannotated 1 1 0 Unknown False False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001224.1:36540-42251:+ gene-Q0120_S288C rna-Q0120_S288C cds-NP_009316.1_S288C 100.0 100.0 Unannotated 1 1 0 Unknown False False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000049.1:71816-77599:- gene-Q0120_SA1 rna-Q0120_SA1 cds-NP_009316.1_SA1 99.7 100.0 Unannotated 1 1 0 Unknown False False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia MBWA01000010.1:27947-29863:+ gene-Q0120_ThermosaccDry rna-Q0120_ThermosaccDry cds-NP_009316.1_ThermosaccDry 95.4 95.8 Unannotated 1 1 0 Unknown False False False False
VR1 GCA_001738595.1 Bioethanol South America MBVZ01000293.1:31480-37272:+ gene-Q0120_VR1 rna-Q0120_VR1 cds-NP_009316.1_VR1 99.3 100.0 Unannotated 1 1 0 Unknown False False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_018044.1:42166-47839:+ gene-Q0120_Sparadoxus rna-Q0120_Sparadoxus cds-NP_009316.1_Sparadoxus 59.0 83.6 Unannotated 1 1 0 Unknown False False False False

Additional files