BI3 (Q0115)

Gene profile

Gene name: BI3
Reference locus (S288C): Q0115
Gene biotype: protein_coding

Description: Cytochrome b mRNA maturase bI3; Mitochondrial mRNA maturase; forms a complex with Mrs1p to mediate splicing of the bI3 intron of the COB gene; encoded by both exon and intron sequences of partially processed COB mRNA

Top 10 interactors (score): RIP1 (0.993); CYT1 (0.991); COX3 (0.988); COX2 (0.987); AI5_ALPHA (0.97); AI5_BETA (0.945); ATP6 (0.944); MRS1 (0.939); AI1 (0.917); COX1 (0.916); QCR6 (0.863); QCR7 (0.86); QCR9 (0.855); AI2 (0.854); BI2 (0.845); QCR8 (0.845); BI4 (0.844); COB (0.813); AI3 (0.8); MAS1 (0.799)

Homologues (species, bitscore): MT-CYB (Homo sapiens, 223.4); mt-Cytb (Mus musculus, 212.6); CYTB (Danio rerio, 215.3); CYTB (Xenopus tropicalis, 214.2); mt:Cyt-b (Drosophila melanogaster, 205.3); CYTB (Caenorhabditis elegans, 152.9); cob (Arabidopsis thaliana, 224.2)

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser

Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia MBVO01000055.1:27183-28733:+ gene-Q0115_AKU4011 rna-Q0115_AKU4011 cds-NP_009317.1_AKU4011 98.4 98.6 Unannotated 1 1 0 Unknown False False False False
Bruggeman GCA_001738585.1 Bread Not Applicable MBVY01000033.1:34098-37825:+ gene-Q0115_Bruggeman rna-Q0115_Bruggeman cds-NP_009317.1_Bruggeman 98.9 100.0 Unannotated 1 1 0 Unknown False False False False
CAT1 GCA_001738705.1 Bioethanol South America MBWC01000376.1:26521-28071:+ gene-Q0115_CAT1 rna-Q0115_CAT1 cds-NP_009317.1_CAT1 98.5 98.6 Unannotated 1 1 0 Unknown False False False False
CBS1585 GCA_001738375.1 Sake Asia MBVS01000067.1:27347-28897:+ gene-Q0115_CBS1585 rna-Q0115_CBS1585 cds-NP_009317.1_CBS1585 98.4 98.6 Unannotated 1 1 0 Unknown False False False False
CBS436 GCA_001738355.1 Sake Asia MBVR01000053.1:31907-35690:+ gene-Q0115_CBS436 rna-Q0115_CBS436 cds-NP_009317.1_CBS436 98.4 100.0 Unannotated 1 1 0 Unknown False False False False
CBS6412 GCA_001738345.1 Sake Asia MBVQ01000062.1:24320-25870:+ gene-Q0115_CBS6412 rna-Q0115_CBS6412 cds-NP_009317.1_CBS6412 98.5 98.6 Unannotated 1 1 0 Unknown False False False False
CBS6413 GCA_001738265.1 Sake Asia MBVP01000101.1:58213-61940:+ gene-Q0115_CBS6413 rna-Q0115_CBS6413 cds-NP_009317.1_CBS6413 99.8 100.0 Unannotated 1 1 0 Unknown False False False False
EthanolRed GCA_001738615.1 Bioethanol Asia MBWB01000074.1:23552-25073:+ gene-Q0115_EthanolRed rna-Q0115_EthanolRed cds-NP_009317.1_EthanolRed 64.8 85.2 Unannotated 1 1 0 Unknown False False False False
FaliES1 GCA_001738715.1 Bioethanol Asia MBWD01000016.1:31015-32536:+ gene-Q0115_FaliES1 rna-Q0115_FaliES1 cds-NP_009317.1_FaliES1 64.8 85.2 Unannotated 1 1 0 Unknown False False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000360.1:1410-5145:+ gene-Q0115_JAY291 rna-Q0115_JAY291 cds-NP_009317.1_JAY291 98.7 100.0 Unannotated 1 1 0 Unknown False False False False
MUCL30387 GCA_001738515.1 Bread Europe MBVX01000168.1:30700-34427:+ gene-Q0115_MUCL30387 rna-Q0115_MUCL30387 cds-NP_009317.1_MUCL30387 98.9 100.0 Unannotated 1 1 0 Unknown False False False False
MUCL30388 GCA_001738495.1 Bread Europe MBVW01000208.1:33381-37108:+ gene-Q0115_MUCL30388 rna-Q0115_MUCL30388 cds-NP_009317.1_MUCL30388 98.9 100.0 Unannotated 1 1 0 Unknown False False False False
MUCL39482 GCA_001738235.1 Sake Asia MBVN01000090.1:20928-22478:+ gene-Q0115_MUCL39482 rna-Q0115_MUCL39482 cds-NP_009317.1_MUCL39482 98.4 98.6 Unannotated 1 1 0 Unknown False False False False
MUCL42920 GCA_001738485.1 Bread Europe MBVV01000309.1:33000-36727:+ gene-Q0115_MUCL42920 rna-Q0115_MUCL42920 cds-NP_009317.1_MUCL42920 98.9 100.0 Unannotated 1 1 0 Unknown False False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011826.1:36540-40265:+ gene-Q0115_NCIM3186 rna-Q0115_NCIM3186 cds-NP_009317.1_NCIM3186 50.8 100.0 Unannotated 1 1 0 Unknown False False False False
NCYC1407 GCA_001738225.1 Sake Asia MBVM01000021.1:33599-35149:+ gene-Q0115_NCYC1407 rna-Q0115_NCYC1407 cds-NP_009317.1_NCYC1407 98.6 98.6 Unannotated 1 1 0 Unknown False False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994156.1:29501-33237:+ gene-Q0115_PE2H3 rna-Q0115_PE2H3 cds-NP_009317.1_PE2H3 98.7 100.0 Unannotated 1 1 0 Unknown False False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999888.1:29501-33237:+ gene-Q0115_PE2H4 rna-Q0115_PE2H4 cds-NP_009317.1_PE2H4 98.7 100.0 Unannotated 1 1 0 Unknown False False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001224.1:36540-40265:+ gene-Q0115_S288C rna-Q0115_S288C cds-NP_009317.1_S288C 100.0 100.0 Unannotated 1 1 0 Unknown False False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000049.1:73876-77599:- gene-Q0115_SA1 rna-Q0115_SA1 cds-NP_009317.1_SA1 98.9 100.0 Unannotated 1 1 0 Unknown False False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia MBWA01000010.1:27947-29468:+ gene-Q0115_ThermosaccDry rna-Q0115_ThermosaccDry cds-NP_009317.1_ThermosaccDry 64.8 85.2 Unannotated 1 1 0 Unknown False False False False
VR1 GCA_001738595.1 Bioethanol South America MBVZ01000293.1:31480-35216:+ gene-Q0115_VR1 rna-Q0115_VR1 cds-NP_009317.1_VR1 98.7 100.0 Unannotated 1 1 0 Unknown False False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_018044.1:42166-45882:+ gene-Q0115_Sparadoxus rna-Q0115_Sparadoxus cds-NP_009317.1_Sparadoxus 85.1 95.0 Unannotated 1 1 0 Unknown False False False False

Additional files