BI2 (Q0110)

Gene profile

Gene name: BI2
Reference locus (S288C): Q0110
Gene biotype: protein_coding

Description: Cytochrome b mRNA maturase bI2; Mitochondrial mRNA maturase with a role in splicing; encoded by both exon and intron sequences of partially processed COB mRNA; In the N-terminal section; belongs to the cytochrome b family

Top 10 interactors (score): RIP1 (0.993); CYT1 (0.991); COX2 (0.99); COX3 (0.976); ATP6 (0.949); AI1 (0.938); AI2 (0.918); COX1 (0.916); QCR6 (0.863); QCR7 (0.86); QCR9 (0.856); QCR8 (0.845); BI3 (0.845); BI4 (0.841); AI5_BETA (0.827); COB (0.823); DSS1 (0.813); AI3 (0.808); MAS1 (0.799); CBP2 (0.78)

Homologues (species, bitscore): MT-CYB (Homo sapiens, 176.0); mt-Cytb (Mus musculus, 169.1); CYTB (Danio rerio, 171.8); CYTB (Xenopus tropicalis, 170.2); mt:Cyt-b (Drosophila melanogaster, 169.5); CYTB (Caenorhabditis elegans, 122.5); cob (Arabidopsis thaliana, 183.0)

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser

Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia MBVO01000055.1:27180-28457:+ gene-Q0110_AKU4011 rna-Q0110_AKU4011 cds-NP_009318.1_AKU4011 68.5 86.4 Unannotated 1 1 0 Unknown False False False False
Bruggeman GCA_001738585.1 Bread Not Applicable MBVY01000033.1:34098-36137:+ gene-Q0110_Bruggeman rna-Q0110_Bruggeman cds-NP_009318.1_Bruggeman 100.0 100.0 Unannotated 1 1 0 Unknown False False False False
CAT1 GCA_001738705.1 Bioethanol South America MBWC01000376.1:26518-27795:+ gene-Q0110_CAT1 rna-Q0110_CAT1 cds-NP_009318.1_CAT1 68.5 86.4 Unannotated 1 1 0 Unknown False False False False
CBS1585 GCA_001738375.1 Sake Asia MBVS01000067.1:27344-28621:+ gene-Q0110_CBS1585 rna-Q0110_CBS1585 cds-NP_009318.1_CBS1585 68.5 86.4 Unannotated 1 1 0 Unknown False False False False
CBS436 GCA_001738355.1 Sake Asia MBVR01000053.1:31907-33860:+ gene-Q0110_CBS436 rna-Q0110_CBS436 cds-NP_009318.1_CBS436 79.5 91.7 Unannotated 1 1 0 Unknown False False False False
CBS6412 GCA_001738345.1 Sake Asia MBVQ01000062.1:24317-25594:+ gene-Q0110_CBS6412 rna-Q0110_CBS6412 cds-NP_009318.1_CBS6412 68.5 86.4 Unannotated 1 1 0 Unknown False False False False
CBS6413 GCA_001738265.1 Sake Asia MBVP01000101.1:58213-60252:+ gene-Q0110_CBS6413 rna-Q0110_CBS6413 cds-NP_009318.1_CBS6413 99.7 100.0 Unannotated 1 1 0 Unknown False False False False
EthanolRed GCA_001738615.1 Bioethanol Asia MBWB01000074.1:23552-23966:+ gene-Q0110_EthanolRed rna-Q0110_EthanolRed cds-NP_009318.1_EthanolRed 32.5 32.6 Unannotated 1 1 0 Unknown False False False False
FaliES1 GCA_001738715.1 Bioethanol Asia MBWD01000016.1:31015-31429:+ gene-Q0110_FaliES1 rna-Q0110_FaliES1 cds-NP_009318.1_FaliES1 32.5 32.6 Unannotated 1 1 0 Unknown False False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000360.1:1410-3448:+ gene-Q0110_JAY291 rna-Q0110_JAY291 cds-NP_009318.1_JAY291 99.6 100.0 Unannotated 1 1 0 Unknown False False False False
MUCL30387 GCA_001738515.1 Bread Europe MBVX01000168.1:30700-32739:+ gene-Q0110_MUCL30387 rna-Q0110_MUCL30387 cds-NP_009318.1_MUCL30387 100.0 100.0 Unannotated 1 1 0 Unknown False False False False
MUCL30388 GCA_001738495.1 Bread Europe MBVW01000208.1:33381-35420:+ gene-Q0110_MUCL30388 rna-Q0110_MUCL30388 cds-NP_009318.1_MUCL30388 100.0 100.0 Unannotated 1 1 0 Unknown False False False False
MUCL39482 GCA_001738235.1 Sake Asia MBVN01000090.1:20925-22202:+ gene-Q0110_MUCL39482 rna-Q0110_MUCL39482 cds-NP_009318.1_MUCL39482 68.5 86.4 Unannotated 1 1 0 Unknown False False False False
MUCL42920 GCA_001738485.1 Bread Europe MBVV01000309.1:33000-35039:+ gene-Q0110_MUCL42920 rna-Q0110_MUCL42920 cds-NP_009318.1_MUCL42920 100.0 100.0 Unannotated 1 1 0 Unknown False False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011826.1:36540-38579:+ gene-Q0110_NCIM3186 rna-Q0110_NCIM3186 cds-NP_009318.1_NCIM3186 59.5 100.0 Unannotated 1 1 0 Unknown False False False False
NCYC1407 GCA_001738225.1 Sake Asia MBVM01000021.1:33596-34873:+ gene-Q0110_NCYC1407 rna-Q0110_NCYC1407 cds-NP_009318.1_NCYC1407 68.6 86.4 Unannotated 1 1 0 Unknown False False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994156.1:29501-31539:+ gene-Q0110_PE2H3 rna-Q0110_PE2H3 cds-NP_009318.1_PE2H3 99.6 100.0 Unannotated 1 1 0 Unknown False False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999888.1:29501-31539:+ gene-Q0110_PE2H4 rna-Q0110_PE2H4 cds-NP_009318.1_PE2H4 99.6 100.0 Unannotated 1 1 0 Unknown False False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001224.1:36540-38579:+ gene-Q0110_S288C rna-Q0110_S288C cds-NP_009318.1_S288C 100.0 100.0 Unannotated 1 1 0 Unknown False False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000049.1:75562-77599:- gene-Q0110_SA1 rna-Q0110_SA1 cds-NP_009318.1_SA1 99.7 100.0 Unannotated 1 1 0 Unknown False False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia MBWA01000010.1:27947-28361:+ gene-Q0110_ThermosaccDry rna-Q0110_ThermosaccDry cds-NP_009318.1_ThermosaccDry 32.5 32.6 Unannotated 1 1 0 Unknown False False False False
VR1 GCA_001738595.1 Bioethanol South America MBVZ01000293.1:31480-33518:+ gene-Q0110_VR1 rna-Q0110_VR1 cds-NP_009318.1_VR1 99.6 100.0 Unannotated 1 1 0 Unknown False False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_018044.1:42166-44092:+ gene-Q0110_Sparadoxus rna-Q0110_Sparadoxus cds-NP_009318.1_Sparadoxus 64.2 85.0 Unannotated 1 1 0 Unknown False False False False

Additional files