Gene name: BFR1
Reference locus (S288C): YOR198C
Gene biotype: protein_coding
Description: Nuclear segregation protein BFR1; Component of mRNP complexes associated with polyribosomes; involved in localization of mRNAs to P bodies; implicated in secretion and nuclear segregation; multicopy suppressor of BFA (Brefeldin A) sensitivity
Top 10 interactors (score): SCP160 (0.988); PUF3 (0.9); NAM8 (0.859); HPF1 (0.852); YOR338W (0.85); BBP1 (0.811); DCP2 (0.809); YDL086W (0.799); PAB1 (0.789); DHH1 (0.789); BIK1 (0.787); RPL25 (0.776); HEK2 (0.753); XRN1 (0.72); YLR256W-A (0.713); RPL34B (0.706); OXP1 (0.702); PXR1 (0.696); ASC1 (0.677); MRPL3 (0.676)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005309.1:709440-710852:- | gene-YOR198C_AKU4011 | rna-NM_001183617.1_AKU4011 | cds-NP_014841.1_AKU4011 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000123.1:111478-112890:- | gene-YOR198C_BG1 | rna-NM_001183617.1_BG1 | cds-NP_014841.1_BG1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005517.1:694271-695683:- | gene-YOR198C_Bruggeman | rna-NM_001183617.1_Bruggeman | cds-NP_014841.1_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005533.1:695553-696965:- | gene-YOR198C_CAT1 | rna-NM_001183617.1_CAT1 | cds-NP_014841.1_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005373.1:692427-693839:- | gene-YOR198C_CBS1585 | rna-NM_001183617.1_CBS1585 | cds-NP_014841.1_CBS1585 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005357.1:691115-692527:- | gene-YOR198C_CBS436 | rna-NM_001183617.1_CBS436 | cds-NP_014841.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005341.1:689545-690957:- | gene-YOR198C_CBS6412 | rna-NM_001183617.1_CBS6412 | cds-NP_014841.1_CBS6412 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005325.1:698184-699596:- | gene-YOR198C_CBS6413 | rna-NM_001183617.1_CBS6413 | cds-NP_014841.1_CBS6413 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001536.1:718408-719820:- | gene-YOR198C_CENPK1137D | rna-NM_001183617.1_CENPK1137D | cds-NP_014841.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005485.1:685570-686982:- | gene-YOR198C_EthanolRed | rna-NM_001183617.1_EthanolRed | cds-NP_014841.1_EthanolRed | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005549.1:690967-692379:- | gene-YOR198C_FaliES1 | rna-NM_001183617.1_FaliES1 | cds-NP_014841.1_FaliES1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000381.1:134370-135782:+ | gene-YOR198C_JAY291 | rna-NM_001183617.1_JAY291 | cds-NP_014841.1_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005421.1:698236-699648:- | gene-YOR198C_MUCL30387 | rna-NM_001183617.1_MUCL30387 | cds-NP_014841.1_MUCL30387 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005453.1:705654-707066:- | gene-YOR198C_MUCL30388 | rna-NM_001183617.1_MUCL30388 | cds-NP_014841.1_MUCL30388 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005293.1:699756-701168:- | gene-YOR198C_MUCL39482 | rna-NM_001183617.1_MUCL39482 | cds-NP_014841.1_MUCL39482 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005437.1:709339-710751:- | gene-YOR198C_MUCL42920 | rna-NM_001183617.1_MUCL42920 | cds-NP_014841.1_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011824.1:718542-719954:- | gene-YOR198C_NCIM3186 | rna-NM_001183617.1_NCIM3186 | cds-NP_014841.1_NCIM3186 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005277.1:699854-701266:- | gene-YOR198C_NCYC1407 | rna-NM_001183617.1_NCYC1407 | cds-NP_014841.1_NCYC1407 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994154.1:699251-700663:- | gene-YOR198C_PE2H3 | rna-NM_001183617.1_PE2H3 | cds-NP_014841.1_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999886.1:709628-711040:- | gene-YOR198C_PE2H4 | rna-NM_001183617.1_PE2H4 | cds-NP_014841.1_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001147.6:718653-720065:- | gene-YOR198C_S288C | rna-NM_001183617.1_S288C | cds-NP_014841.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000006.1:128658-130070:- | gene-YOR198C_SA1 | rna-NM_001183617.1_SA1 | cds-NP_014841.1_SA1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005501.1:690152-691564:- | gene-YOR198C_ThermosaccDry | rna-NM_001183617.1_ThermosaccDry | cds-NP_014841.1_ThermosaccDry | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005469.1:753691-755103:- | gene-YOR198C_VR1 | rna-NM_001183617.1_VR1 | cds-NP_014841.1_VR1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000032.1:423065-424477:- | gene-YOR198C_ZTW1 | rna-NM_001183617.1_ZTW1 | cds-NP_014841.1_ZTW1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047501.1:696042-697454:- | gene-YOR198C_Sparadoxus | rna-NM_001183617.1_Sparadoxus | cds-NP_014841.1_Sparadoxus | 92.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |