Gene name: BEM4
Reference locus (S288C): YPL161C
Gene biotype: protein_coding
Description: Bud emergence protein 4; Protein involved in establishment of cell polarity and bud emergence; interacts with the Rho1p small GTP-binding protein and with the Rho-type GTPase Cdc42p; involved in maintenance of proper telomere length
Top 10 interactors (score): CDC42 (0.965); GIC2 (0.933); GIC1 (0.924); RHO1 (0.889); CDC24 (0.837); CDC11 (0.829); CDC12 (0.808); SPR28 (0.8); MSB1 (0.775); CLA4 (0.765); BNI1 (0.762); RSR1 (0.755); BEM1 (0.728); BEM2 (0.714); BEM3 (0.675); RHO4 (0.633); FKS1 (0.631); SPA2 (0.617); ROM2 (0.593); PKC1 (0.591)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005310.1:221985-223886:- | gene-YPL161C_AKU4011 | rna-NM_001183975.1_AKU4011 | cds-NP_015164.1_AKU4011 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000069.1:427653-429554:- | gene-YPL161C_BG1 | rna-NM_001183975.1_BG1 | cds-NP_015164.1_BG1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005518.1:247975-249876:- | gene-YPL161C_Bruggeman | rna-NM_001183975.1_Bruggeman | cds-NP_015164.1_Bruggeman | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005534.1:244642-246543:- | gene-YPL161C_CAT1 | rna-NM_001183975.1_CAT1 | cds-NP_015164.1_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005374.1:226048-227949:- | gene-YPL161C_CBS1585 | rna-NM_001183975.1_CBS1585 | cds-NP_015164.1_CBS1585 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005358.1:240705-242606:- | gene-YPL161C_CBS436 | rna-NM_001183975.1_CBS436 | cds-NP_015164.1_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005342.1:230726-232627:- | gene-YPL161C_CBS6412 | rna-NM_001183975.1_CBS6412 | cds-NP_015164.1_CBS6412 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005326.1:222688-224589:- | gene-YPL161C_CBS6413 | rna-NM_001183975.1_CBS6413 | cds-NP_015164.1_CBS6413 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001537.1:244203-246104:- | gene-YPL161C_CENPK1137D | rna-NM_001183975.1_CENPK1137D | cds-NP_015164.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005486.1:220715-222616:- | gene-YPL161C_EthanolRed | rna-NM_001183975.1_EthanolRed | cds-NP_015164.1_EthanolRed | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005550.1:228307-230208:- | gene-YPL161C_FaliES1 | rna-NM_001183975.1_FaliES1 | cds-NP_015164.1_FaliES1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000007.1:135690-137591:+ | gene-YPL161C_JAY291 | rna-NM_001183975.1_JAY291 | cds-NP_015164.1_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005422.1:239218-241119:- | gene-YPL161C_MUCL30387 | rna-NM_001183975.1_MUCL30387 | cds-NP_015164.1_MUCL30387 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005454.1:237234-239135:- | gene-YPL161C_MUCL30388 | rna-NM_001183975.1_MUCL30388 | cds-NP_015164.1_MUCL30388 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005294.1:219377-221278:- | gene-YPL161C_MUCL39482 | rna-NM_001183975.1_MUCL39482 | cds-NP_015164.1_MUCL39482 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005438.1:276106-278007:- | gene-YPL161C_MUCL42920 | rna-NM_001183975.1_MUCL42920 | cds-NP_015164.1_MUCL42920 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011825.1:244302-246203:- | gene-YPL161C_NCIM3186 | rna-NM_001183975.1_NCIM3186 | cds-NP_015164.1_NCIM3186 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005278.1:225834-227741:- | gene-YPL161C_NCYC1407 | rna-NM_001183975.1_NCYC1407 | cds-NP_015164.1_NCYC1407 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994155.1:233267-235168:- | gene-YPL161C_PE2H3 | rna-NM_001183975.1_PE2H3 | cds-NP_015164.1_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999887.1:232910-234811:- | gene-YPL161C_PE2H4 | rna-NM_001183975.1_PE2H4 | cds-NP_015164.1_PE2H4 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001148.4:244319-246220:- | gene-YPL161C_S288C | rna-NM_001183975.1_S288C | cds-NP_015164.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000012.1:127464-129365:+ | gene-YPL161C_SA1 | rna-NM_001183975.1_SA1 | cds-NP_015164.1_SA1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005502.1:228105-230006:- | gene-YPL161C_ThermosaccDry | rna-NM_001183975.1_ThermosaccDry | cds-NP_015164.1_ThermosaccDry | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005470.1:243038-244939:- | gene-YPL161C_VR1 | rna-NM_001183975.1_VR1 | cds-NP_015164.1_VR1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000033.1:227433-229334:- | gene-YPL161C_ZTW1 | rna-NM_001183975.1_ZTW1 | cds-NP_015164.1_ZTW1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047502.1:228966-230903:- | gene-YPL161C_Sparadoxus | rna-NM_001183975.1_Sparadoxus | cds-NP_015164.1_Sparadoxus | 83.5 | 99.6 | Verified | 1 | 1 | 1 | False | True | False | False | False |