Gene name: BEM2
Reference locus (S288C): YER155C
Gene biotype: protein_coding
Description: GTPase-activating protein BEM2/IPL2; Rho GTPase activating protein (RhoGAP); involved in the control of cytoskeleton organization and cellular morphogenesis; required for bud emergence; potential GAP for Rho4p
Top 10 interactors (score): RHO1 (0.991); CDC42 (0.966); RHO2 (0.906); BEM1 (0.905); ROM2 (0.889); SIT4 (0.879); RGA1 (0.874); MSB1 (0.871); CLA4 (0.87); LRG1 (0.86); SPA2 (0.846); RHO4 (0.844); ACT1 (0.841); CDC24 (0.831); SAC7 (0.826); RDI1 (0.823); ROM1 (0.821); BNI1 (0.814); RGA2 (0.803); TPM1 (0.777)
Homologues (species, bitscore): ARHGAP27 (Homo sapiens, 121.7); Arhgap23 (Mus musculus, 117.5); arhgap12a (Danio rerio, 116.7); arhgap12 (Xenopus tropicalis, 119.8); RhoGAP1A (Drosophila melanogaster, 99.8); pac-1 (Caenorhabditis elegans, 104.0); AT5G61530 (Arabidopsis thaliana, 60.8)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005299.1:463853-470356:- | gene-YER155C_AKU4011 | rna-NM_001179045.3_AKU4011 | cds-NP_011082.3_AKU4011 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000176.1:62689-69192:+ | gene-YER155C_BG1 | rna-NM_001179045.3_BG1 | cds-NP_011082.3_BG1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005507.1:475131-481634:- | gene-YER155C_Bruggeman | rna-NM_001179045.3_Bruggeman | cds-NP_011082.3_Bruggeman | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005523.1:462976-469479:- | gene-YER155C_CAT1 | rna-NM_001179045.3_CAT1 | cds-NP_011082.3_CAT1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005363.1:463663-470166:- | gene-YER155C_CBS1585 | rna-NM_001179045.3_CBS1585 | cds-NP_011082.3_CBS1585 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005347.1:467474-473977:- | gene-YER155C_CBS436 | rna-NM_001179045.3_CBS436 | cds-NP_011082.3_CBS436 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005331.1:462181-468684:- | gene-YER155C_CBS6412 | rna-NM_001179045.3_CBS6412 | cds-NP_011082.3_CBS6412 | 99.3 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005315.1:470217-476720:- | gene-YER155C_CBS6413 | rna-NM_001179045.3_CBS6413 | cds-NP_011082.3_CBS6413 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001526.1:474118-480621:- | gene-YER155C_CENPK1137D | rna-NM_001179045.3_CENPK1137D | cds-NP_011082.3_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005475.1:470134-476637:- | gene-YER155C_EthanolRed | rna-NM_001179045.3_EthanolRed | cds-NP_011082.3_EthanolRed | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005539.1:470720-477223:- | gene-YER155C_FaliES1 | rna-NM_001179045.3_FaliES1 | cds-NP_011082.3_FaliES1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000111.1:9270-15773:+ | gene-YER155C_JAY291 | rna-NM_001179045.3_JAY291 | cds-NP_011082.3_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005411.1:463881-470384:- | gene-YER155C_MUCL30387 | rna-NM_001179045.3_MUCL30387 | cds-NP_011082.3_MUCL30387 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005443.1:466780-473283:- | gene-YER155C_MUCL30388 | rna-NM_001179045.3_MUCL30388 | cds-NP_011082.3_MUCL30388 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005283.1:459620-466123:- | gene-YER155C_MUCL39482 | rna-NM_001179045.3_MUCL39482 | cds-NP_011082.3_MUCL39482 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005427.1:471947-478450:- | gene-YER155C_MUCL42920 | rna-NM_001179045.3_MUCL42920 | cds-NP_011082.3_MUCL42920 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011814.1:476344-482847:- | gene-YER155C_NCIM3186 | rna-NM_001179045.3_NCIM3186 | cds-NP_011082.3_NCIM3186 | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005267.1:469086-475589:- | gene-YER155C_NCYC1407 | rna-NM_001179045.3_NCYC1407 | cds-NP_011082.3_NCYC1407 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994144.1:484766-491269:- | gene-YER155C_PE2H3 | rna-NM_001179045.3_PE2H3 | cds-NP_011082.3_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999876.1:474707-481210:- | gene-YER155C_PE2H4 | rna-NM_001179045.3_PE2H4 | cds-NP_011082.3_PE2H4 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001137.3:476345-482848:- | gene-YER155C_S288C | rna-NM_001179045.3_S288C | cds-NP_011082.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000030.1:34245-40748:- | gene-YER155C_SA1 | rna-NM_001179045.3_SA1 | cds-NP_011082.3_SA1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005491.1:471520-478023:- | gene-YER155C_ThermosaccDry | rna-NM_001179045.3_ThermosaccDry | cds-NP_011082.3_ThermosaccDry | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005459.1:464630-471133:- | gene-YER155C_VR1 | rna-NM_001179045.3_VR1 | cds-NP_011082.3_VR1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000010.1:26479-32982:- | gene-YER155C_ZTW1 | rna-NM_001179045.3_ZTW1 | cds-NP_011082.3_ZTW1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047491.1:472526-479050:- | gene-YER155C_Sparadoxus | rna-NM_001179045.3_Sparadoxus | cds-NP_011082.3_Sparadoxus | 90.2 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |