Gene name: BEM1
Reference locus (S288C): YBR200W
Gene biotype: protein_coding
Description: Bud emergence protein 1; Protein containing SH3-domains; involved in establishing cell polarity and morphogenesis; functions as a scaffold protein for complexes that include Cdc24p, Ste5p, Ste20p, and Rsr1p
Top 10 interactors (score): CDC24 (0.999); STE20 (0.999); BOI2 (0.999); CLA4 (0.999); CDC42 (0.999); BOI1 (0.995); RSR1 (0.995); ACT1 (0.988); SEC15 (0.984); EXO70 (0.982); FAR1 (0.981); RHO3 (0.972); STE5 (0.969); SKM1 (0.966); BNI1 (0.953); MSB1 (0.952); PKC1 (0.946); SPA2 (0.938); BEM3 (0.936); RDI1 (0.931)
Homologues (species, bitscore): SH3PXD2B (Homo sapiens, 62.8); Sorbs3 (Mus musculus, 62.8); sh3pxd2b (Danio rerio, 66.2); sh3pxd2b (Xenopus tropicalis, 62.0); CAP (Drosophila melanogaster, 63.2); B0303.7 (Caenorhabditis elegans, 57.0)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005296.1:604243-605898:+ | gene-YBR200W_AKU4011 | rna-NM_001178548.3_AKU4011 | cds-NP_009759.3_AKU4011 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000179.1:594243-595898:+ | gene-YBR200W_BG1 | rna-NM_001178548.3_BG1 | cds-NP_009759.3_BG1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005518.1:410098-411753:+ | gene-YBR200W_Bruggeman | rna-NM_001178548.3_Bruggeman | cds-NP_009759.3_Bruggeman | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005520.1:609504-611159:+ | gene-YBR200W_CAT1 | rna-NM_001178548.3_CAT1 | cds-NP_009759.3_CAT1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005360.1:596024-597679:+ | gene-YBR200W_CBS1585 | rna-NM_001178548.3_CBS1585 | cds-NP_009759.3_CBS1585 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005344.1:603569-605224:+ | gene-YBR200W_CBS436 | rna-NM_001178548.3_CBS436 | cds-NP_009759.3_CBS436 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005328.1:692633-694288:+ | gene-YBR200W_CBS6412 | rna-NM_001178548.3_CBS6412 | cds-NP_009759.3_CBS6412 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005312.1:601830-603485:+ | gene-YBR200W_CBS6413 | rna-NM_001178548.3_CBS6413 | cds-NP_009759.3_CBS6413 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001523.1:614646-616301:+ | gene-YBR200W_CENPK1137D | rna-NM_001178548.3_CENPK1137D | cds-NP_009759.3_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005472.1:729399-731054:+ | gene-YBR200W_EthanolRed | rna-NM_001178548.3_EthanolRed | cds-NP_009759.3_EthanolRed | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005536.1:620310-621965:+ | gene-YBR200W_FaliES1 | rna-NM_001178548.3_FaliES1 | cds-NP_009759.3_FaliES1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000023.1:13910-15565:+ | gene-YBR200W_JAY291 | rna-NM_001178548.3_JAY291 | cds-NP_009759.3_JAY291 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005408.1:608777-610432:+ | gene-YBR200W_MUCL30387 | rna-NM_001178548.3_MUCL30387 | cds-NP_009759.3_MUCL30387 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005440.1:625854-627509:+ | gene-YBR200W_MUCL30388 | rna-NM_001178548.3_MUCL30388 | cds-NP_009759.3_MUCL30388 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005280.1:594397-596052:+ | gene-YBR200W_MUCL39482 | rna-NM_001178548.3_MUCL39482 | cds-NP_009759.3_MUCL39482 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005424.1:603823-605478:+ | gene-YBR200W_MUCL42920 | rna-NM_001178548.3_MUCL42920 | cds-NP_009759.3_MUCL42920 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011811.1:620669-622324:+ | gene-YBR200W_NCIM3186 | rna-NM_001178548.3_NCIM3186 | cds-NP_009759.3_NCIM3186 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005264.1:596505-598160:+ | gene-YBR200W_NCYC1407 | rna-NM_001178548.3_NCYC1407 | cds-NP_009759.3_NCYC1407 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994141.1:609115-610770:+ | gene-YBR200W_PE2H3 | rna-NM_001178548.3_PE2H3 | cds-NP_009759.3_PE2H3 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999873.1:606791-608446:+ | gene-YBR200W_PE2H4 | rna-NM_001178548.3_PE2H4 | cds-NP_009759.3_PE2H4 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001134.8:620872-622527:+ | gene-YBR200W_S288C | rna-NM_001178548.3_S288C | cds-NP_009759.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000080.1:28565-30220:+ | gene-YBR200W_SA1 | rna-NM_001178548.3_SA1 | cds-NP_009759.3_SA1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005488.1:619320-620975:+ | gene-YBR200W_ThermosaccDry | rna-NM_001178548.3_ThermosaccDry | cds-NP_009759.3_ThermosaccDry | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005456.1:600491-602146:+ | gene-YBR200W_VR1 | rna-NM_001178548.3_VR1 | cds-NP_009759.3_VR1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000003.1:593937-595592:+ | gene-YBR200W_ZTW1 | rna-NM_001178548.3_ZTW1 | cds-NP_009759.3_ZTW1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047488.1:636563-638218:+ | gene-YBR200W_Sparadoxus | rna-NM_001178548.3_Sparadoxus | cds-NP_009759.3_Sparadoxus | 92.9 | 100.0 | Verified | 1 | 1 | 0 | False | False | False | True | False |