BDH2 (YAL061W)


Gene profile

Gene name: BDH2
Reference locus (S288C): YAL061W
Gene biotype: protein_coding

Description: Probable diacetyl reductase [(R)-acetoin forming] 2; Putative medium-chain alcohol dehydrogenase with similarity to BDH1; transcription induced by constitutively active PDR1 and PDR3; Belongs to the zinc-containing alcohol dehydrogenase family

Top 10 interactors (score): BDH1 (0.953); SOL4 (0.923); MSC1 (0.922); CTT1 (0.916); TSL1 (0.904); DCS2 (0.883); RTN2 (0.864); GAD1 (0.863); RTC3 (0.859); PGM2 (0.857); ALD3 (0.838); XBP1 (0.831); YNL194C (0.831); OM45 (0.822); TFS1 (0.815); GLC3 (0.802); TPS2 (0.755); FMP45 (0.749); YDR246W-A (0.747); STF2 (0.736)

Homologues (species, bitscore): SORD (Homo sapiens, 131.7); Sord (Mus musculus, 127.1); LOC570613 (Danio rerio, 120.2); sord (Xenopus tropicalis, 127.5); Sodh-1 (Drosophila melanogaster, 139.0); R04B5.5 (Caenorhabditis elegans, 137.1); AT5G51970 (Arabidopsis thaliana, 122.9)

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005295.1:18595-19848:+ gene-YAL061W_AKU4011 rna-NM_001178203.1_AKU4011 cds-NP_009340.1_AKU4011 99.6 100.0 Verified 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000070.1:5680-6933:+ gene-YAL061W_BG1 rna-NM_001178203.1_BG1 cds-NP_009340.1_BG1 99.6 100.0 Verified 1 1 1 False True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005503.1:32803-34056:+ gene-YAL061W_Bruggeman rna-NM_001178203.1_Bruggeman cds-NP_009340.1_Bruggeman 99.2 100.0 Verified 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005519.1:19313-20566:+ gene-YAL061W_CAT1 rna-NM_001178203.1_CAT1 cds-NP_009340.1_CAT1 99.1 100.0 Verified 1 1 1 False True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005359.1:31619-32872:+ gene-YAL061W_CBS1585 rna-NM_001178203.1_CBS1585 cds-NP_009340.1_CBS1585 99.1 100.0 Verified 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005343.1:31858-33111:+ gene-YAL061W_CBS436 rna-NM_001178203.1_CBS436 cds-NP_009340.1_CBS436 99.2 100.0 Mismatch 1 1 1 False True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005327.1:17758-19011:+ gene-YAL061W_CBS6412 rna-NM_001178203.1_CBS6412 cds-NP_009340.1_CBS6412 99.6 100.0 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005311.1:29879-31132:+ gene-YAL061W_CBS6413 rna-NM_001178203.1_CBS6413 cds-NP_009340.1_CBS6413 99.1 100.0 Verified 1 1 1 False True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001522.1:33506-34759:+ gene-YAL061W_CENPK1137D rna-NM_001178203.1_CENPK1137D cds-NP_009340.1_CENPK1137D 99.0 100.0 Verified 1 1 1 False True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005471.1:20012-21265:+ gene-YAL061W_EthanolRed rna-NM_001178203.1_EthanolRed cds-NP_009340.1_EthanolRed 99.4 100.0 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005535.1:33955-35208:+ gene-YAL061W_FaliES1 rna-NM_001178203.1_FaliES1 cds-NP_009340.1_FaliES1 99.4 100.0 Verified 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000084.1:5902-7155:+ gene-YAL061W_JAY291 rna-NM_001178203.1_JAY291 cds-NP_009340.1_JAY291 99.1 100.0 Verified 1 1 1 False True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005407.1:34559-35812:+ gene-YAL061W_MUCL30387 rna-NM_001178203.1_MUCL30387 cds-NP_009340.1_MUCL30387 99.1 100.0 Verified 1 1 1 False True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005439.1:31103-32355:+ gene-YAL061W_MUCL30388 rna-NM_001178203.1_MUCL30388 cds-NP_009340.1_MUCL30388 99.2 99.9 Unannotated 1 1 0 False False False True False
MUCL39482 GCA_001738235.1 Sake Asia CM005279.1:30421-31674:+ gene-YAL061W_MUCL39482 rna-NM_001178203.1_MUCL39482 cds-NP_009340.1_MUCL39482 99.0 100.0 Verified 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005423.1:32760-34013:+ gene-YAL061W_MUCL42920 rna-NM_001178203.1_MUCL42920 cds-NP_009340.1_MUCL42920 99.2 100.0 Verified 1 1 1 False True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011810.1:33325-34578:+ gene-YAL061W_NCIM3186 rna-NM_001178203.1_NCIM3186 cds-NP_009340.1_NCIM3186 98.8 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005263.1:18285-19538:+ gene-YAL061W_NCYC1407 rna-NM_001178203.1_NCYC1407 cds-NP_009340.1_NCYC1407 99.2 100.0 Verified 1 1 1 False True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994140.1:20161-21414:+ gene-YAL061W_PE2H3 rna-NM_001178203.1_PE2H3 cds-NP_009340.1_PE2H3 99.1 100.0 Verified 1 1 1 False True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999872.1:19882-21135:+ gene-YAL061W_PE2H4 rna-NM_001178203.1_PE2H4 cds-NP_009340.1_PE2H4 99.1 100.0 Verified 1 1 1 False True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001133.9:33448-34701:+ gene-YAL061W_S288C rna-NM_001178203.1_S288C cds-NP_009340.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000084.1:8059-9312:+ gene-YAL061W_SA1 rna-NM_001178203.1_SA1 cds-NP_009340.1_SA1 99.6 100.0 Verified 1 1 1 False True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005487.1:34164-35417:+ gene-YAL061W_ThermosaccDry rna-NM_001178203.1_ThermosaccDry cds-NP_009340.1_ThermosaccDry 99.6 100.0 Verified 1 1 1 False True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005455.1:34922-36175:+ gene-YAL061W_VR1 rna-NM_001178203.1_VR1 cds-NP_009340.1_VR1 99.0 100.0 Verified 1 1 1 False True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000002.1:5972-7225:+ gene-YAL061W_ZTW1 rna-NM_001178203.1_ZTW1 cds-NP_009340.1_ZTW1 99.2 100.0 Verified 1 1 1 False True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047487.1:23676-24929:+ gene-YAL061W_Sparadoxus rna-NM_001178203.1_Sparadoxus cds-NP_009340.1_Sparadoxus 90.5 100.0 Verified 1 1 1 False True False False False

Additional files