Gene name: BBC1
Reference locus (S288C): YJL020C
Gene biotype: protein_coding
Description: Myosin tail region-interacting protein MTI1; Protein possibly involved in assembly of actin patches; interacts with an actin assembly factor Las17p and with the SH3 domains of Type I myosins Myo3p and Myo5p; localized predominantly to cortical actin patches
Top 10 interactors (score): LAS17 (0.993); BZZ1 (0.991); MYO3 (0.988); MYO5 (0.985); VRP1 (0.982); RVS167 (0.966); PAN1 (0.941); ARP2 (0.928); LSB1 (0.928); BOI2 (0.927); YSC84 (0.92); PIN3 (0.92); AIM21 (0.918); SLA1 (0.915); EDE1 (0.911); SLA2 (0.898); HSE1 (0.897); SAC6 (0.886); END3 (0.878); CAP2 (0.87)
Homologues (species, bitscore): PDCD6IP (Homo sapiens, 50.1); Rbm26 (Mus musculus, 57.0); asap2b (Danio rerio, 60.8); dp (Drosophila melanogaster, 68.9)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005304.1:381892-385563:- | gene-YJL020C_AKU4011 | rna-NM_001181454.1_AKU4011 | cds-NP_012514.2_AKU4011 | 92.8 | 99.1 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000190.1:228595-232218:+ | gene-YJL020C_BG1 | rna-NM_001181454.1_BG1 | cds-NP_012514.2_BG1 | 93.4 | 99.1 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005512.1:396093-399650:- | gene-YJL020C_Bruggeman | rna-NM_001181454.1_Bruggeman | cds-NP_012514.2_Bruggeman | 95.1 | 98.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005528.1:400043-403636:- | gene-YJL020C_CAT1 | rna-NM_001181454.1_CAT1 | cds-NP_012514.2_CAT1 | 94.6 | 99.3 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005368.1:393565-397152:- | gene-YJL020C_CBS1585 | rna-NM_001181454.1_CBS1585 | cds-NP_012514.2_CBS1585 | 94.9 | 99.3 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005352.1:411915-415532:- | gene-YJL020C_CBS436 | rna-NM_001181454.1_CBS436 | cds-NP_012514.2_CBS436 | 95.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005336.1:382154-385377:- | gene-YJL020C_CBS6412 | rna-NM_001181454.1_CBS6412 | cds-NP_012514.2_CBS6412 | 91.6 | 92.8 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005320.1:384035-387592:- | gene-YJL020C_CBS6413 | rna-NM_001181454.1_CBS6413 | cds-NP_012514.2_CBS6413 | 97.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001531.1:381358-384831:- | gene-YJL020C_CENPK1137D | rna-NM_001181454.1_CENPK1137D | cds-NP_012514.2_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005480.1:385110-388436:- | gene-YJL020C_EthanolRed | rna-NM_001181454.1_EthanolRed | cds-NP_012514.2_EthanolRed | 95.5 | 95.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005544.1:397558-401181:- | gene-YJL020C_FaliES1 | rna-NM_001181454.1_FaliES1 | cds-NP_012514.2_FaliES1 | 94.0 | 99.1 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000200.1:14402-17874:+ | gene-YJL020C_JAY291 | rna-NM_001181454.1_JAY291 | cds-NP_012514.2_JAY291 | 98.7 | 99.7 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005416.1:396337-399989:- | gene-YJL020C_MUCL30387 | rna-NM_001181454.1_MUCL30387 | cds-NP_012514.2_MUCL30387 | 92.7 | 98.7 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005448.1:392480-395956:- | gene-YJL020C_MUCL30388 | rna-NM_001181454.1_MUCL30388 | cds-NP_012514.2_MUCL30388 | 96.9 | 98.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005288.1:386882-390469:- | gene-YJL020C_MUCL39482 | rna-NM_001181454.1_MUCL39482 | cds-NP_012514.2_MUCL39482 | 94.9 | 99.3 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005432.1:392223-395923:- | gene-YJL020C_MUCL42920 | rna-NM_001181454.1_MUCL42920 | cds-NP_012514.2_MUCL42920 | 93.4 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011819.1:398916-402389:- | gene-YJL020C_NCIM3186 | rna-NM_001181454.1_NCIM3186 | cds-NP_012514.2_NCIM3186 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005272.1:384831-388382:- | gene-YJL020C_NCYC1407 | rna-NM_001181454.1_NCYC1407 | cds-NP_012514.2_NCYC1407 | 95.7 | 99.1 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994149.1:396904-400536:- | gene-YJL020C_PE2H3 | rna-NM_001181454.1_PE2H3 | cds-NP_012514.2_PE2H3 | 95.1 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999881.1:396550-400143:- | gene-YJL020C_PE2H4 | rna-NM_001181454.1_PE2H4 | cds-NP_012514.2_PE2H4 | 94.7 | 99.3 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001142.9:398937-402410:- | gene-YJL020C_S288C | rna-NM_001181454.1_S288C | cds-NP_012514.2_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000003.1:194470-198063:- | gene-YJL020C_SA1 | rna-NM_001181454.1_SA1 | cds-NP_012514.2_SA1 | 94.7 | 99.3 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005496.1:391217-394840:- | gene-YJL020C_ThermosaccDry | rna-NM_001181454.1_ThermosaccDry | cds-NP_012514.2_ThermosaccDry | 93.9 | 99.1 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005464.1:393062-396514:- | gene-YJL020C_VR1 | rna-NM_001181454.1_VR1 | cds-NP_012514.2_VR1 | 96.8 | 98.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000021.1:371886-375338:- | gene-YJL020C_ZTW1 | rna-NM_001181454.1_ZTW1 | cds-NP_012514.2_ZTW1 | 99.1 | 99.3 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047496.1:397498-401013:- | gene-YJL020C_Sparadoxus | rna-NM_001181454.1_Sparadoxus | cds-NP_012514.2_Sparadoxus | 81.7 | 98.3 | Verified | 1 | 1 | 1 | False | True | False | False | False |