BAT1 (YHR208W)


Gene profile

Gene name: BAT1
Reference locus (S288C): YHR208W
Gene biotype: protein_coding

Description: Branched-chain-amino-acid aminotransferase, mitochondrial; Mitochondrial branched-chain amino acid (BCAA) aminotransferase; preferentially involved in BCAA biosynthesis; homolog of murine ECA39; highly expressed during logarithmic phase and repressed during stationary phase; BAT1 has a paralog, BAT2, that arose from the whole genome duplication; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family

Top 10 interactors (score): ILV3 (0.997); BAT2 (0.982); LEU4 (0.963); ILV1 (0.959); OAC1 (0.957); LEU1 (0.952); LEU9 (0.948); ALD5 (0.939); ARO10 (0.929); ECM31 (0.926); CYS3 (0.919); ILV5 (0.915); STR2 (0.911); YLL058W (0.911); YML082W (0.911); PDC1 (0.91); CHA1 (0.908); PDC6 (0.904); PDC5 (0.904); THI3 (0.904)

Homologues (species, bitscore): BCAT1 (Homo sapiens, 322.0); Bcat1 (Mus musculus, 335.5); bcat1 (Danio rerio, 336.3); bcat2 (Xenopus tropicalis, 321.6); CG1673 (Drosophila melanogaster, 317.0); bcat-1 (Caenorhabditis elegans, 309.3); BCAT7 (Arabidopsis thaliana, 177.9)

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005302.1:504583-505764:+ gene-YHR208W_AKU4011 rna-NM_001179339.3_AKU4011 cds-NP_012078.3_AKU4011 99.6 100.0 Verified 1 1 1 True True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000141.1:11971-13152:- gene-YHR208W_BG1 rna-NM_001179339.3_BG1 cds-NP_012078.3_BG1 99.7 100.0 Verified 1 1 1 True True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005510.1:512070-513251:+ gene-YHR208W_Bruggeman rna-NM_001179339.3_Bruggeman cds-NP_012078.3_Bruggeman 99.8 100.0 Verified 1 1 1 True True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005526.1:508617-509798:+ gene-YHR208W_CAT1 rna-NM_001179339.3_CAT1 cds-NP_012078.3_CAT1 99.7 100.0 Verified 1 1 1 True True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005366.1:504001-505182:+ gene-YHR208W_CBS1585 rna-NM_001179339.3_CBS1585 cds-NP_012078.3_CBS1585 99.6 100.0 Verified 1 1 1 True True False False False
CBS436 GCA_001738355.1 Sake Asia CM005350.1:502371-503552:+ gene-YHR208W_CBS436 rna-NM_001179339.3_CBS436 cds-NP_012078.3_CBS436 99.7 100.0 Mismatch 1 1 1 True True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005334.1:504119-505300:+ gene-YHR208W_CBS6412 rna-NM_001179339.3_CBS6412 cds-NP_012078.3_CBS6412 99.6 100.0 Mismatch 1 1 1 True True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005318.1:505387-506568:+ gene-YHR208W_CBS6413 rna-NM_001179339.3_CBS6413 cds-NP_012078.3_CBS6413 99.6 100.0 Verified 1 1 1 True True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001529.1:510810-511991:+ gene-YHR208W_CENPK1137D rna-NM_001179339.3_CENPK1137D cds-NP_012078.3_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005478.1:563137-564318:+ gene-YHR208W_EthanolRed rna-NM_001179339.3_EthanolRed cds-NP_012078.3_EthanolRed 99.7 100.0 Verified 1 1 1 True True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005542.1:505588-506769:+ gene-YHR208W_FaliES1 rna-NM_001179339.3_FaliES1 cds-NP_012078.3_FaliES1 99.7 100.0 Verified 1 1 1 True True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000071.1:12342-13523:+ gene-YHR208W_JAY291 rna-NM_001179339.3_JAY291 cds-NP_012078.3_JAY291 99.7 100.0 Verified 1 1 1 True True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005414.1:513168-514349:+ gene-YHR208W_MUCL30387 rna-NM_001179339.3_MUCL30387 cds-NP_012078.3_MUCL30387 99.8 100.0 Verified 1 1 1 True True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005446.1:512822-514003:+ gene-YHR208W_MUCL30388 rna-NM_001179339.3_MUCL30388 cds-NP_012078.3_MUCL30388 99.8 100.0 Verified 1 1 1 True True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005286.1:504118-505299:+ gene-YHR208W_MUCL39482 rna-NM_001179339.3_MUCL39482 cds-NP_012078.3_MUCL39482 99.6 100.0 Verified 1 1 1 True True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005430.1:519457-520638:+ gene-YHR208W_MUCL42920 rna-NM_001179339.3_MUCL42920 cds-NP_012078.3_MUCL42920 99.8 100.0 Verified 1 1 1 True True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011817.1:517414-518595:+ gene-YHR208W_NCIM3186 rna-NM_001179339.3_NCIM3186 cds-NP_012078.3_NCIM3186 99.6 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005270.1:506418-507599:+ gene-YHR208W_NCYC1407 rna-NM_001179339.3_NCYC1407 cds-NP_012078.3_NCYC1407 99.6 100.0 Verified 1 1 1 True True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994147.1:505590-506771:+ gene-YHR208W_PE2H3 rna-NM_001179339.3_PE2H3 cds-NP_012078.3_PE2H3 99.7 100.0 Verified 1 1 1 True True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999879.1:513017-514198:+ gene-YHR208W_PE2H4 rna-NM_001179339.3_PE2H4 cds-NP_012078.3_PE2H4 99.7 100.0 Verified 1 1 1 True True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001140.6:517532-518713:+ gene-YHR208W_S288C rna-NM_001179339.3_S288C cds-NP_012078.3_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000112.1:12415-13596:+ gene-YHR208W_SA1 rna-NM_001179339.3_SA1 cds-NP_012078.3_SA1 99.6 100.0 Verified 1 1 1 True True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005494.1:506857-508038:+ gene-YHR208W_ThermosaccDry rna-NM_001179339.3_ThermosaccDry cds-NP_012078.3_ThermosaccDry 99.7 100.0 Verified 1 1 1 True True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005462.1:515857-517038:+ gene-YHR208W_VR1 rna-NM_001179339.3_VR1 cds-NP_012078.3_VR1 99.8 100.0 Verified 1 1 1 True True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000017.1:496919-498100:+ gene-YHR208W_ZTW1 rna-NM_001179339.3_ZTW1 cds-NP_012078.3_ZTW1 99.8 100.0 Verified 1 1 1 True True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047494.1:503642-504823:+ gene-YHR208W_Sparadoxus rna-NM_001179339.3_Sparadoxus cds-NP_012078.3_Sparadoxus 91.8 100.0 Verified 1 1 1 False True False False False

Additional files