Gene name: BAP3
Reference locus (S288C): YDR046C
Gene biotype: protein_coding
Description: Valine amino-acid permease; Amino acid permease; involved in uptake of cysteine, leucine, isoleucine and valine; BAP3 has a paralog, BAP2, that arose from the whole genome duplication
Top 10 interactors (score): HEM12 (0.806); PTR3 (0.746); PTR2 (0.739); SSY5 (0.695); UGA4 (0.693); MEP3 (0.66); STP2 (0.618); STP1 (0.614); AVT5 (0.604); MEP1 (0.584); UGA3 (0.574); IAH1 (0.571); VBA5 (0.563); PAU8 (0.554); MUP3 (0.536); MEP2 (0.529); UBP11 (0.526); CAR1 (0.514); GNP1 (0.51); DAL82 (0.499)
Homologues (species, bitscore): SLC7A8 (Homo sapiens, 54.3); Slc7a8 (Mus musculus, 52.4); slc7a10b (Danio rerio, 54.7); slc7a5 (Xenopus tropicalis, 60.5); CG12531 (Drosophila melanogaster, 60.5); B0454.6 (Caenorhabditis elegans, 56.6)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005298.1:526293-528107:- | gene-YDR046C_AKU4011 | rna-NM_001180354.3_AKU4011 | cds-NP_010331.3_AKU4011 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000102.1:27103-28917:+ | gene-YDR046C_BG1 | rna-NM_001180354.3_BG1 | cds-NP_010331.3_BG1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005506.1:558643-560457:- | gene-YDR046C_Bruggeman | rna-NM_001180354.3_Bruggeman | cds-NP_010331.3_Bruggeman | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005522.1:541643-543457:- | gene-YDR046C_CAT1 | rna-NM_001180354.3_CAT1 | cds-NP_010331.3_CAT1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005362.1:517249-519063:- | gene-YDR046C_CBS1585 | rna-NM_001180354.3_CBS1585 | cds-NP_010331.3_CBS1585 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005346.1:542419-544233:- | gene-YDR046C_CBS436 | rna-NM_001180354.3_CBS436 | cds-NP_010331.3_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005330.1:513661-515475:- | gene-YDR046C_CBS6412 | rna-NM_001180354.3_CBS6412 | cds-NP_010331.3_CBS6412 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005314.1:542330-544144:- | gene-YDR046C_CBS6413 | rna-NM_001180354.3_CBS6413 | cds-NP_010331.3_CBS6413 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001525.1:547725-549539:- | gene-YDR046C_CENPK1137D | rna-NM_001180354.3_CENPK1137D | cds-NP_010331.3_CENPK1137D | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005474.1:528119-529933:- | gene-YDR046C_EthanolRed | rna-NM_001180354.3_EthanolRed | cds-NP_010331.3_EthanolRed | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005538.1:534559-536373:- | gene-YDR046C_FaliES1 | rna-NM_001180354.3_FaliES1 | cds-NP_010331.3_FaliES1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000246.1:18340-20154:+ | gene-YDR046C_JAY291 | rna-NM_001180354.3_JAY291 | cds-NP_010331.3_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005410.1:543304-545118:- | gene-YDR046C_MUCL30387 | rna-NM_001180354.3_MUCL30387 | cds-NP_010331.3_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005442.1:533725-535539:- | gene-YDR046C_MUCL30388 | rna-NM_001180354.3_MUCL30388 | cds-NP_010331.3_MUCL30388 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005282.1:518620-520434:- | gene-YDR046C_MUCL39482 | rna-NM_001180354.3_MUCL39482 | cds-NP_010331.3_MUCL39482 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005426.1:448852-450666:- | gene-YDR046C_MUCL42920 | rna-NM_001180354.3_MUCL42920 | cds-NP_010331.3_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011813.1:548685-550499:- | gene-YDR046C_NCIM3186 | rna-NM_001180354.3_NCIM3186 | cds-NP_010331.3_NCIM3186 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005266.1:517555-519369:- | gene-YDR046C_NCYC1407 | rna-NM_001180354.3_NCYC1407 | cds-NP_010331.3_NCYC1407 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994143.1:537183-538997:- | gene-YDR046C_PE2H3 | rna-NM_001180354.3_PE2H3 | cds-NP_010331.3_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999875.1:536488-538302:- | gene-YDR046C_PE2H4 | rna-NM_001180354.3_PE2H4 | cds-NP_010331.3_PE2H4 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001136.10:548762-550576:- | gene-YDR046C_S288C | rna-NM_001180354.3_S288C | cds-NP_010331.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000011.1:94912-96726:+ | gene-YDR046C_SA1 | rna-NM_001180354.3_SA1 | cds-NP_010331.3_SA1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005490.1:534295-536109:- | gene-YDR046C_ThermosaccDry | rna-NM_001180354.3_ThermosaccDry | cds-NP_010331.3_ThermosaccDry | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005458.1:547001-548815:- | gene-YDR046C_VR1 | rna-NM_001180354.3_VR1 | cds-NP_010331.3_VR1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000006.1:531908-533722:- | gene-YDR046C_ZTW1 | rna-NM_001180354.3_ZTW1 | cds-NP_010331.3_ZTW1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047490.1:536283-538097:- | gene-YDR046C_Sparadoxus | rna-NM_001180354.3_Sparadoxus | cds-NP_010331.3_Sparadoxus | 90.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |