Gene name: AVT7
Reference locus (S288C): YIL088C
Gene biotype: protein_coding
Description: Vacuolar amino acid transporter 7; Putative transporter; member of a family of seven S. cerevisiae genes (AVT1-7) related to vesicular GABA-glycine transporters
Top 10 interactors (score): AVT3 (0.935); AVT1 (0.89); AVT4 (0.861); PIG2 (0.76); MUP3 (0.732); AAT2 (0.724); UGA4 (0.693); PUT4 (0.606); MUP1 (0.606); LST7 (0.465); TRP5 (0.465)
Homologues (species, bitscore): SLC38A7 (Homo sapiens, 76.6); Slc38a7 (Mus musculus, 73.6); slc38a10 (Danio rerio, 76.3); slc38a6 (Xenopus tropicalis, 72.4); CG30394 (Drosophila melanogaster, 75.5); Y51F10.4 (Caenorhabditis elegans, 95.9); AT3G30390 (Arabidopsis thaliana, 83.6)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005303.1:200033-201505:- | gene-YIL088C_AKU4011 | rna-NM_001179436.1_AKU4011 | cds-NP_012178.1_AKU4011 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000164.1:61970-63442:- | gene-YIL088C_BG1 | rna-NM_001179436.1_BG1 | cds-NP_012178.1_BG1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005511.1:205202-206674:- | gene-YIL088C_Bruggeman | rna-NM_001179436.1_Bruggeman | cds-NP_012178.1_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005527.1:195735-197207:- | gene-YIL088C_CAT1 | rna-NM_001179436.1_CAT1 | cds-NP_012178.1_CAT1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005367.1:199604-201076:- | gene-YIL088C_CBS1585 | rna-NM_001179436.1_CBS1585 | cds-NP_012178.1_CBS1585 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005351.1:190227-191699:- | gene-YIL088C_CBS436 | rna-NM_001179436.1_CBS436 | cds-NP_012178.1_CBS436 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005335.1:196981-198453:- | gene-YIL088C_CBS6412 | rna-NM_001179436.1_CBS6412 | cds-NP_012178.1_CBS6412 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005319.1:191524-192996:- | gene-YIL088C_CBS6413 | rna-NM_001179436.1_CBS6413 | cds-NP_012178.1_CBS6413 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001530.1:189268-190740:- | gene-YIL088C_CENPK1137D | rna-NM_001179436.1_CENPK1137D | cds-NP_012178.1_CENPK1137D | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005479.1:184328-185800:- | gene-YIL088C_EthanolRed | rna-NM_001179436.1_EthanolRed | cds-NP_012178.1_EthanolRed | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005543.1:201234-202706:- | gene-YIL088C_FaliES1 | rna-NM_001179436.1_FaliES1 | cds-NP_012178.1_FaliES1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000025.1:26795-28267:+ | gene-YIL088C_JAY291 | rna-NM_001179436.1_JAY291 | cds-NP_012178.1_JAY291 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005415.1:203667-205139:- | gene-YIL088C_MUCL30387 | rna-NM_001179436.1_MUCL30387 | cds-NP_012178.1_MUCL30387 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005447.1:200276-201748:- | gene-YIL088C_MUCL30388 | rna-NM_001179436.1_MUCL30388 | cds-NP_012178.1_MUCL30388 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005287.1:200451-201923:- | gene-YIL088C_MUCL39482 | rna-NM_001179436.1_MUCL39482 | cds-NP_012178.1_MUCL39482 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005431.1:203813-205285:- | gene-YIL088C_MUCL42920 | rna-NM_001179436.1_MUCL42920 | cds-NP_012178.1_MUCL42920 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011818.1:197931-199403:- | gene-YIL088C_NCIM3186 | rna-NM_001179436.1_NCIM3186 | cds-NP_012178.1_NCIM3186 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005271.1:204728-206200:- | gene-YIL088C_NCYC1407 | rna-NM_001179436.1_NCYC1407 | cds-NP_012178.1_NCYC1407 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994148.1:198716-200188:- | gene-YIL088C_PE2H3 | rna-NM_001179436.1_PE2H3 | cds-NP_012178.1_PE2H3 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999880.1:193090-194562:- | gene-YIL088C_PE2H4 | rna-NM_001179436.1_PE2H4 | cds-NP_012178.1_PE2H4 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001141.2:197931-199403:- | gene-YIL088C_S288C | rna-NM_001179436.1_S288C | cds-NP_012178.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000111.1:6242-7714:+ | gene-YIL088C_SA1 | rna-NM_001179436.1_SA1 | cds-NP_012178.1_SA1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005495.1:199899-201371:- | gene-YIL088C_ThermosaccDry | rna-NM_001179436.1_ThermosaccDry | cds-NP_012178.1_ThermosaccDry | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005463.1:196781-198253:- | gene-YIL088C_VR1 | rna-NM_001179436.1_VR1 | cds-NP_012178.1_VR1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000019.1:174164-175636:- | gene-YIL088C_ZTW1 | rna-NM_001179436.1_ZTW1 | cds-NP_012178.1_ZTW1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047495.1:197961-199433:- | gene-YIL088C_Sparadoxus | rna-NM_001179436.1_Sparadoxus | cds-NP_012178.1_Sparadoxus | 89.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |