Gene name: AVT5
Reference locus (S288C): YBL089W
Gene biotype: protein_coding
Description: Vacuolar amino acid transporter 5; Putative transporter; member of a family of seven S. cerevisiae genes (AVT1-7) related to vesicular GABA-glycine transporters; AVT5 has a paralog, AVT6, that arose from the whole genome duplication
Top 10 interactors (score): GAP1 (0.9); SSY1 (0.795); TMS1 (0.756); BAP2 (0.739); TAT1 (0.736); TAT2 (0.734); DIP5 (0.72); PTR3 (0.714); PUT4 (0.701); AVT1 (0.698); SSY5 (0.696); STP1 (0.695); FUR4 (0.691); RSP5 (0.685); BUL2 (0.66); MUP1 (0.657); BUL1 (0.651); ALP1 (0.649); AGP1 (0.643); GNP1 (0.64)
Homologues (species, bitscore): SLC38A7 (Homo sapiens, 94.7); Slc38a7 (Mus musculus, 100.1); slc38a7 (Danio rerio, 103.2); slc38a7 (Xenopus tropicalis, 89.4); CG30394 (Drosophila melanogaster, 104.4); Y51F10.4 (Caenorhabditis elegans, 73.6); AT3G56200 (Arabidopsis thaliana, 85.1)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005296.1:43119-44498:+ | gene-YBL089W_AKU4011 | rna-NM_001178329.1_AKU4011 | cds-NP_009464.2_AKU4011 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000179.1:33816-35195:+ | gene-YBL089W_BG1 | rna-NM_001178329.1_BG1 | cds-NP_009464.2_BG1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005504.1:43746-45125:+ | gene-YBL089W_Bruggeman | rna-NM_001178329.1_Bruggeman | cds-NP_009464.2_Bruggeman | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005520.1:45674-47053:+ | gene-YBL089W_CAT1 | rna-NM_001178329.1_CAT1 | cds-NP_009464.2_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005360.1:35201-36580:+ | gene-YBL089W_CBS1585 | rna-NM_001178329.1_CBS1585 | cds-NP_009464.2_CBS1585 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005344.1:44007-45386:+ | gene-YBL089W_CBS436 | rna-NM_001178329.1_CBS436 | cds-NP_009464.2_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005328.1:34992-36371:+ | gene-YBL089W_CBS6412 | rna-NM_001178329.1_CBS6412 | cds-NP_009464.2_CBS6412 | 99.0 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005312.1:41279-42658:+ | gene-YBL089W_CBS6413 | rna-NM_001178329.1_CBS6413 | cds-NP_009464.2_CBS6413 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001523.1:43229-44608:+ | gene-YBL089W_CENPK1137D | rna-NM_001178329.1_CENPK1137D | cds-NP_009464.2_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005472.1:57372-58751:+ | gene-YBL089W_EthanolRed | rna-NM_001178329.1_EthanolRed | cds-NP_009464.2_EthanolRed | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005536.1:57501-58880:+ | gene-YBL089W_FaliES1 | rna-NM_001178329.1_FaliES1 | cds-NP_009464.2_FaliES1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000184.1:34539-35918:+ | gene-YBL089W_JAY291 | rna-NM_001178329.1_JAY291 | cds-NP_009464.2_JAY291 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005408.1:42887-44266:+ | gene-YBL089W_MUCL30387 | rna-NM_001178329.1_MUCL30387 | cds-NP_009464.2_MUCL30387 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005440.1:43559-44938:+ | gene-YBL089W_MUCL30388 | rna-NM_001178329.1_MUCL30388 | cds-NP_009464.2_MUCL30388 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005280.1:35351-36730:+ | gene-YBL089W_MUCL39482 | rna-NM_001178329.1_MUCL39482 | cds-NP_009464.2_MUCL39482 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005424.1:42226-43605:+ | gene-YBL089W_MUCL42920 | rna-NM_001178329.1_MUCL42920 | cds-NP_009464.2_MUCL42920 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011811.1:49371-50750:+ | gene-YBL089W_NCIM3186 | rna-NM_001178329.1_NCIM3186 | cds-NP_009464.2_NCIM3186 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005264.1:37027-38406:+ | gene-YBL089W_NCYC1407 | rna-NM_001178329.1_NCYC1407 | cds-NP_009464.2_NCYC1407 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994141.1:43336-44715:+ | gene-YBL089W_PE2H3 | rna-NM_001178329.1_PE2H3 | cds-NP_009464.2_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999873.1:40978-42357:+ | gene-YBL089W_PE2H4 | rna-NM_001178329.1_PE2H4 | cds-NP_009464.2_PE2H4 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001134.8:49574-50953:+ | gene-YBL089W_S288C | rna-NM_001178329.1_S288C | cds-NP_009464.2_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000004.1:33680-35059:+ | gene-YBL089W_SA1 | rna-NM_001178329.1_SA1 | cds-NP_009464.2_SA1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005488.1:57462-58841:+ | gene-YBL089W_ThermosaccDry | rna-NM_001178329.1_ThermosaccDry | cds-NP_009464.2_ThermosaccDry | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005456.1:39664-41043:+ | gene-YBL089W_VR1 | rna-NM_001178329.1_VR1 | cds-NP_009464.2_VR1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000003.1:34683-36062:+ | gene-YBL089W_ZTW1 | rna-NM_001178329.1_ZTW1 | cds-NP_009464.2_ZTW1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047488.1:69427-70803:+ | gene-YBL089W_Sparadoxus | rna-NM_001178329.1_Sparadoxus | cds-NP_009464.2_Sparadoxus | 88.5 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |