Gene name: AVT4
Reference locus (S288C): YNL101W
Gene biotype: protein_coding
Description: Vacuolar transporter; exports large neutral amino acids from the vacuole; member of a family of seven S. cerevisiae genes (AVT1-7) related to vesicular GABA-glycine transporters; localizes to sites of contact between the vacuole and mitochondria (vCLAMPs)
Top 10 interactors (score): ATG22 (0.972); AVT6 (0.937); AVT3 (0.871); AVT7 (0.861); VBA2 (0.782); VBA3 (0.771); VBA1 (0.762); YHC3 (0.71); OAF1 (0.705); YBR285W (0.696); YBR138C (0.619); SIT4 (0.614); VHS2 (0.612); ATG15 (0.599); OCA1 (0.574); PRM10 (0.569); MIC27 (0.566); AVT1 (0.551); SGE1 (0.547); AIM3 (0.527)
Homologues (species, bitscore): SLC36A1 (Homo sapiens, 152.9); Slc36a1 (Mus musculus, 145.2); slc36a1 (Danio rerio, 134.4); slc36a1 (Xenopus tropicalis, 144.4); CG13384 (Drosophila melanogaster, 146.7); Y43F4B.7 (Caenorhabditis elegans, 109.4); AT5G65990 (Arabidopsis thaliana, 123.2)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005308.1:428665-430806:+ | gene-YNL101W_AKU4011 | rna-NM_001182939.1_AKU4011 | cds-NP_014298.1_AKU4011 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000155.1:332662-334803:+ | gene-YNL101W_BG1 | rna-NM_001182939.1_BG1 | cds-NP_014298.1_BG1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005516.1:439380-441521:+ | gene-YNL101W_Bruggeman | rna-NM_001182939.1_Bruggeman | cds-NP_014298.1_Bruggeman | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005532.1:482417-484558:+ | gene-YNL101W_CAT1 | rna-NM_001182939.1_CAT1 | cds-NP_014298.1_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005372.1:429272-431413:+ | gene-YNL101W_CBS1585 | rna-NM_001182939.1_CBS1585 | cds-NP_014298.1_CBS1585 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005356.1:497682-499823:+ | gene-YNL101W_CBS436 | rna-NM_001182939.1_CBS436 | cds-NP_014298.1_CBS436 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005340.1:424432-426573:+ | gene-YNL101W_CBS6412 | rna-NM_001182939.1_CBS6412 | cds-NP_014298.1_CBS6412 | 99.2 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005324.1:425748-427889:+ | gene-YNL101W_CBS6413 | rna-NM_001182939.1_CBS6413 | cds-NP_014298.1_CBS6413 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001535.1:428849-430990:+ | gene-YNL101W_CENPK1137D | rna-NM_001182939.1_CENPK1137D | cds-NP_014298.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005484.1:425672-427813:+ | gene-YNL101W_EthanolRed | rna-NM_001182939.1_EthanolRed | cds-NP_014298.1_EthanolRed | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005548.1:421570-423711:+ | gene-YNL101W_FaliES1 | rna-NM_001182939.1_FaliES1 | cds-NP_014298.1_FaliES1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000140.1:9198-11339:+ | gene-YNL101W_JAY291 | rna-NM_001182939.1_JAY291 | cds-NP_014298.1_JAY291 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005420.1:435554-437695:+ | gene-YNL101W_MUCL30387 | rna-NM_001182939.1_MUCL30387 | cds-NP_014298.1_MUCL30387 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005452.1:470936-473077:+ | gene-YNL101W_MUCL30388 | rna-NM_001182939.1_MUCL30388 | cds-NP_014298.1_MUCL30388 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005292.1:426673-428814:+ | gene-YNL101W_MUCL39482 | rna-NM_001182939.1_MUCL39482 | cds-NP_014298.1_MUCL39482 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005436.1:430679-432820:+ | gene-YNL101W_MUCL42920 | rna-NM_001182939.1_MUCL42920 | cds-NP_014298.1_MUCL42920 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011823.1:434968-437109:+ | gene-YNL101W_NCIM3186 | rna-NM_001182939.1_NCIM3186 | cds-NP_014298.1_NCIM3186 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005276.1:428791-430932:+ | gene-YNL101W_NCYC1407 | rna-NM_001182939.1_NCYC1407 | cds-NP_014298.1_NCYC1407 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994153.1:427709-429850:+ | gene-YNL101W_PE2H3 | rna-NM_001182939.1_PE2H3 | cds-NP_014298.1_PE2H3 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999885.1:427115-429256:+ | gene-YNL101W_PE2H4 | rna-NM_001182939.1_PE2H4 | cds-NP_014298.1_PE2H4 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001146.8:434999-437140:+ | gene-YNL101W_S288C | rna-NM_001182939.1_S288C | cds-NP_014298.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000024.1:19960-22101:+ | gene-YNL101W_SA1 | rna-NM_001182939.1_SA1 | cds-NP_014298.1_SA1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005500.1:422444-424586:+ | gene-YNL101W_ThermosaccDry | rna-NM_001182939.1_ThermosaccDry | cds-NP_014298.1_ThermosaccDry | 99.4 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005468.1:441141-443282:+ | gene-YNL101W_VR1 | rna-NM_001182939.1_VR1 | cds-NP_014298.1_VR1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000030.1:332251-334392:+ | gene-YNL101W_ZTW1 | rna-NM_001182939.1_ZTW1 | cds-NP_014298.1_ZTW1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047500.1:433319-435460:+ | gene-YNL101W_Sparadoxus | rna-NM_001182939.1_Sparadoxus | cds-NP_014298.1_Sparadoxus | 90.6 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |